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Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
ATpy (Astronomical Tables in Python) is a Python module aimed at dealing with tables of astronomical data with a common API. To date, the following formats are supported: FITS, VO, and IPAC tables, and SQLite, MySQL, and PostgreSQL databases
ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
Give your IT, operations, and business teams the ability to deliver exceptional services—without the complexity.
Freshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
A web-based system for upoading, managing, sharing, and analyzing bioinformatic data. The system is primarily written in python, and runs on both linux and MacOs.
Everyday Software for the Researcher of Restricted Means: This project is intended to offer scientists and students with small budgets advanced versions of aqua-built desktop-editing, graphics and statistical applications for MacOSX.
A Python library bringing together utilities I've written over the years for work in bioinformatics and biostatistics, which should be generally applicable outside these fields as well. Focuses on string processing, DBI, and math.
A collection of python scripts to create and handle an XML corpus (a large collection of text for linguistic purpose) from an original Wikipedia database backup dump. It includes a regular expression based parser for the MediaWiki markup language.
JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts
Design and develop Recommendation and Adaptive Prediction Engines to address eCommerce opportunities. Build a portfolio of engines by creating and porting algorithms from multiple disciplines to a usable form. Try to solve NetFlix and other challenges.
pyDATR is an implementation of the DATR language written in Python and usable as Python library. It provides a means for persistence and some extensability with Python functions.
The Flamenco search and browse interface framework uses hierarchical faceted metadata to allow users to both refine and expand queries, while maintaining a consistent representation of a collection and seamlessly integrating keyword queries.
openSputnik is a robust distributed platform for massive scale precalculation of genetic and genomic data using contemporary bioinformatics methods. Annotated DNA, RNA and protein sequences are stored as binary objects in a variery of relational database
The NHD Software Project is a collection of the utilities, scripts, APIs, standards, and application extensions used for the quality assurance of stream and river data, conflation/generalisation of hydrographic data, and other hydrologic data maintenance.
This project exists as a central meeting place for those wishing to share in-house developed applications and tools for local government (and related industries) in Australia.
Dairy Herder is a web application that allows dairies to track lineage and production records for their cows. A main goal is to have a pedigree generated for any given animal with the click of a button.
JReferences is a tool to store and retrieve bibliographic references from a file or MySQLdatabase.
It reads BibTeXML, DocBook XML and RIS type references, and can output these and BibTex.
A bibtex like alternative is also provided for DocBook XML docu
Project Galileo at Sourceforge.net aims to provide developers a unique opportunity to develop open source software for an on-line telescope for schools across the UK. See http://www.projectgalileo.org.uk for more details.
PySOS, a python-based implementation of the OGC SOS standard. PySOS is a lightweight set of scripts that work in conjunction with a web server to serve data from a relational database.
Labcoat for SuperWikia Alpha fabrication manages new or revised fabrication processes. Its 'Cleanroom' applets allow codesmiths to access the lab environment, used to create semiconductors, substrate prototypes, chipset instruction blocks and other Labcoat projects. Our extensions in future releases will include UML support for C#/C++ conforming projects, import/export architecture schematics and refactoring sub-projects.