Showing 114 open source projects for "matlab to python conversion"

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  • 1
    ebfformat

    ebfformat

    An Efficient Binary data Format

    EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code if needed. It is also designed to simplify the programming of input output routines in different programming languages. ...
    Downloads: 5 This Week
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  • 2
    QtiPlot
    QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
    Downloads: 70 This Week
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  • 3
    Finite Element Method Magnetics

    Finite Element Method Magnetics

    Finite element analysis of electromagnetic devices

    Solves low frequency magnetic, electrostatic, heat flow, and current flow problems on 2D and axisymmetric domains via the finite element method.
    Downloads: 32 This Week
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  • 4
    CasADi
    A symbolic framework for C++, Python and Octave implementing automatic differentiation by source code transformation in forward and reverse modes on sparse matrix-valued computational graphs.
    Downloads: 7 This Week
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  • 5
    raxmlGUI
    RELEASE NOTE: Get raxmlGUI 2.0 at the NEW PROJECT LOCATION: https://antonellilab.github.io/raxmlGUI/ raxmlGUI is a graphical user interface to RAxML, one of the most popular and widely used software for phylogenetic inference using maximum likelihood. A userfriendly graphical front-end for phylogenetic analyses using RAxML (Stamatakis, 2006). Please cite: Silvestro, Michalak (2012) - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335-337. DOI:...
    Downloads: 15 This Week
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  • 6
    LaueTools

    LaueTools

    open source python packages for X-ray MicroLaue Diffraction analysis

    LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools
    Downloads: 2 This Week
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  • 7

    reditools

    RNA editing detection by NGS data

    REDItools are python scripts developed with the aim to study RNA editing at genomic scale by next generation sequencing data. RNA editing is a post-transcriptional phenomenon involving the insertion/deletion or substitution of specific bases in precise RNA localizations. In human, RNA editing occurs by deamination of cytosine to uridine (C-to-U) or mostly by the adenosine to inosine (A-to-I) conversion through ADAR enzymes.
    Downloads: 2 This Week
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  • 8
    Spectral-SpecPro

    Spectral-SpecPro

    Spectral - software for manipulating optical spectroscopy data

    Spectral-SpecPro helps with the manipulation of optical spectroscopy data. Spectral takes files produced by Jasco instruments (uv-vis absorbance, fluorescence, circular dichroism readings as a function of wavelength, temperature, or time) and facilitates basic operations such as unit conversion (CD spectra), conversion into the format taken by CDPro (estimation of secondary structure; CD spectra), scatter correction (absorbance spectra), smoothing, re-sampling of the x-axis, and generic...
    Downloads: 0 This Week
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  • 9
    ctrax
    Ctrax is a machine vision program for estimating the positions and orientations of many walking fruit flies, maintaining their individual identities over long periods of time with minimal supervision, and on average for 1.5 fly-hours automatically.
    Downloads: 40 This Week
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  • 10

    Microarray Integrator (MAI)

    Microarray Integrator for heterogeneous human/mouse Affymetrix arrays

    The Microarray Integrator is freely available programs to integrate heterogeneous Affymetrix microarrays for human and mouse. The cell-type-specific genes or condition-specific genes can be screened in the integrated microarrays by MAI result.
    Downloads: 0 This Week
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  • 11
    SCALEXTRIC_CONTROLLER

    SCALEXTRIC_CONTROLLER

    An open source controller for Scalextric community

    Open source controller for Scalextric community. Scalextric Controller is composed by a custom hand controller, used to drive the Scalextric slots cars, and Android application used to communicate with the hand controller via Bluethoot low power (BLE). This project repository contains the PCB project, the micro embedded software, the Android App and the 3D CAD design of the cricital mechanical parts.
    Downloads: 0 This Week
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  • 12

    Gene-Environment iNteraction Simulator 2

    A tool able to simulate gene-environment and gene-gene interactions.

    Gene-Environment iNteraction Simulator 2 (GENS2) simulates interactions among two genetic and one environmental factor and also allows for epistatic interactions. GENS2 is based on data with realistic patterns of linkage disequilibrium, and imposes no limitations either on the number of individuals to be simulated or on number of non-predisposing genetic/environmental factors to be considered. The GENS2 tool is able to simulate gene-environment and gene-gene interactions. To make the...
    Downloads: 1 This Week
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  • 13
    This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
    Downloads: 0 This Week
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  • 14

    P3BSseq

    Parallel processing pipeline for analysis of bisulfite sequencing data

    Bisulfite sequencing (BSseq) processing is among the most cumbersome next generation sequencing (NGS) applications. Though some BSseq processing tools are available, they are scattered, require puzzling parameters and are running-time and memory-usage demanding. We have developed P3BSseq, a parallel processing pipeline for fast, accurate and automatic analysis of BSseq reads that trims, aligns, annotates, records the intermediate results, performs bisulfite conversion quality assessment,...
    Downloads: 0 This Week
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  • 15
    Toastpp

    Toastpp

    Forward and inverse modelling in optical tomography

    ...It allows 3D reconstruction of absorption and scattering distributions inside an object from boundary measurements of light transmission, using steady state, time domain or frequency domain information. Matlab and Python bindings exist for ease of use and fast prototyping.
    Downloads: 2 This Week
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  • 16
    WavePacket

    WavePacket

    Dynamics of quantum systems, controlled by external fields

    ...With its visualization of quantum dynamics generated 'on the fly', WavePacket is suitable for teaching quantum mechanics as well as for research projects, see also the numerous demonstration examples . While the Matlab/Octave version is already in a mature state, the C++/Python version is still under construction. Using tensor train techniques, the additional WaveTrain package aims at beating the curse of dimensionality.
    Downloads: 0 This Week
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  • 17

    dxf2pcb

    Convert DXF drawings of circuit boards to gEDA-PCB files.

    This Python script reads in a DXF (ascii) file and generates a PCB output compatible with PCB Designer, part of the gEDA suite. It is designed for two purposes: One is to generate a PCB snippet from a mechanical drawing (such as a board outline), the other is to produce element files from CAD drawings. PCB snippets are easily imported into an existing gEDA-PCB project using File -> Load Layout to Buffer. Generated element files are ready to use (except for special cases like no-paste...
    Downloads: 0 This Week
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  • 18
    Yet Another Audio Feature Extractor is a toolbox for audio analysis. Easy to use and efficient at extracting a large number of audio features simultaneously. WAV and MP3 files supported, or embedding in C++, Python or Matlab applications.
    Downloads: 0 This Week
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  • 19
    NiftyRec
    This project, developed at UCL London, provides code for tomographic reconstruction. NiftyRec is written in C and has Python and Matlab extensions. Computationally intensive functions have a GPU accelerated version based on CUDA.
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    Downloads: 1 This Week
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  • 20
    psignifit is a toolbox to fit psychometric functions and test hypotheses on psychometric data. This is version 3 which will now predominantly support python.
    Downloads: 0 This Week
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  • 21

    SCaVis

    Scientific Computation and Visualization Environment

    SCaVis is an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with Java and a number of scripting languages: Jython (Python), Groovy, JRuby, BeanShell. SCaVis can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. Linear, non-linear and symbolic regression are also available. Elements of symbolic computations using Octave/Matlab scripting are supported. ...
    Downloads: 0 This Week
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  • 22

    wmtsa-python

    Discrete wavelet methods for time series analysis using python

    Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices.
    Downloads: 0 This Week
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  • 23
    sfunctioner is a GUI wizard written in PyQt for creating Matlab Simulink sfunctions quickly and efficiently. It helps creating a fully functional sfunction within a few minutes.
    Downloads: 0 This Week
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  • 24
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
    Downloads: 0 This Week
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  • 25

    LibppGam

    pp->gamma cross sections parametrization

    This library contains the parametrization of pp->gamma cross section functions based on Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369) work. The functions are written in Python, Fortran and Matlab. Please, if you use this library DO NOT reference to this webpage, instead reference to Phys.Rev. D90 (2014) 12, 123014 (astro-ph/1406.7369), "Parametrization of gamma-ray production cross-sections for pp interactions in a broad proton energy range from the kinematic threshold to PeV energies" by Ervin Kafexhiu, Felix Aharonian, Andrew M. ...
    Downloads: 0 This Week
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