Search Results for "flat file databases" - Page 2

PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.

metaProt is a python pipeline to analyze and extract data from protein sequences found in metagenomic projects. It integrates several existing tools (HMMer, Pepstats, Blast...) to be used against custom databases. Please, read the README.txt file to find more about this.

A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file (e.g., proportion of character/numeric values, min/mean/median/max, missing values, correlation with a target column)...

A tool for autonomous and virtual topical data integration using the focused web-harvesting method.

Metmask has moved to github http://github.com/hredestig/metmask Metmask is a tool written in python for managing chemical identifiers for metabolomics experiments. It can incorporate identifiers from local textfiles, several online databases, query PubChem and record all found associations in a local sqlite database.

ATpy (Astronomical Tables in Python) is a Python module aimed at dealing with tables of astronomical data with a common API. To date, the following formats are supported: FITS, VO, and IPAC tables, and SQLite, MySQL, and PostgreSQL databases

Directory of geoinformational data and metadata, like georeferenced list of streets in your city, or list of known nomenclature map tiles, and tools to process this data.

ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.

This project is for maintaining a linux system that concentrates on math, logic, and geometry related softwares.

DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV

The Automatic Model Optimization Reference Implementation, AMORI, is a framework that integrates the modelling and the optimization processes by providing a plug-in interface for both. A genetic algorithm and Markov simulations are currently implemented.

ParticleStats is software for analysing tracked particles from RNA Localization experiments. Analysis is performed on the X and Y coordinated of the tracked RNA particles

This project contains applications which allow the user the draw the common geometry graphics (both 2D and 3D) which is available from the library.

easyDevice is a open source project for telit modules GM862 and GM863. Main software targets are vehicle location tracking, data history functionality and making sure there are no data losses when data is transfered to server.

Crawl a LiveJournal-based blog hosting for friends data. LiveJournal is a blog hosting engine that allows its users to list others as friends. This tool can download most of the data about friendship relations between users for later processing.

Graphical or terminal-based stopwatch with many user-named lap timers. Save / restore timing results via CSV file; timer "runs" even when application isn't running! Supports lap timer label templates. Hildonized (i.e., also runs on Maemo / Nokia 770).

This project provides one or more subset solutions for the UK National Health Service National Programme for IT. This project provides basic tools for the production and maintenance of SNOMED CT Clinical Terminology subsets.

pySPACE is a modular software for processing of large data streams that has been specifically designed to enable distributed execution and empirical evaluation of signal processing chains. Various signal processing algorithms (so called nodes) are available within the software, from finite impulse response filters over data-dependent spatial filters (e.g. CSP, xDAWN) to established classifiers (e.g. SVM, LDA). pySPACE incorporates the concept of node and node chains of the MDP framework. Due...

GpxBase - simple GPS data manipulation Copy/Move/Delete/Update Waypoints/Tracks/Routes within a list of GPX/KML files. Open source solution to keep track of personal GEO Data Base from different sources (GPS devices, Google software and other).

A public repository of open source scripts and small programs related to linguistics and language.

A tool to practice and learn Multiple-Choice tests which are very popular at universities. Developed by a team of german Medicine students who wants to bring the "Gegenstandskatalog" to more than Windows.

Crujisim is a tool to allow Air Traffic Controllers trainees to practice in a radar environment. Different users connect to a hosting server to act either as controllers for adjacent positions or pseudopilots.

Simulador de trânsito. Objetivos: - Criar um modelo de trânsito, abrangendo espaço urbano, automóveis e motoristas; - Permitir pesquisa a respeito de otimização do trânsito. Escrito em Delphi (ou não).

This software screens a given peak list against web based NMR databases (nmrshiftdb, HMDB...) and return possible molecules. It also take a given molecule to return expected peaks list.