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KU1K is a set of tools for 4D,5D and 6D compact U(1) lattice gauge theory Monte Carlo simulation using the Skipis-Vantzos algorithm. As the calculations involved, even for the 4D case, are consuming, the project is modular so as to run on the Grid.
DNAID software is a tool for assessing confidence in biological identifications made by comparing DNA sequences. It allows DNA sequences to be placed within a taxonomy and determines confidence in matches of a query sequence to each taxon.
Medical Image Computing Workflow (MICFlow) is a simple, easy but flexible, extensible and powerful workflow system to automate medical image computing tasks such as segmentation, registration and analysis. It's pure Python so can be used on any platform
SIP (Sample Inventory Program) is a web application for managing mass quantities of lab samples. It is the first out-of-the-box Zope 3 app, and is field-proven.
SIP may be used as-is, or as inspiration for other Zope 3 apps. (e.g. O/R RDBMS storage)
MongoDB Atlas is the developer-friendly database used to build, scale, and run gen AI and LLM-powered apps—without needing a separate vector database. Atlas offers built-in vector search, global availability across 115+ regions, and flexible document modeling. Start building AI apps faster, all in one place.
A mouse tracker for OS X. The tool should provide a simple way to log the user's mouse movements in the background for (later) analysis. Currently only for Mac OS X (ObjC & Cocoa), planned to make platform independent with Python. It consists out of two
A Open Source project with the main goal to make a simple way to display 3D objects from a Geodatabase (PostgreSQL/PostGIS) on the Web. This project was created by OpenGEO (www.opengeo.com.br).
allTunes is an audible interface for the iTunes for Windows media player. This software is targetted mainly for use of by blind or visually-impaired users.
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A tag based personal note taking system, written in python using sqlite.
This program is designed to help you organize your thoughts. It uses tags in a way similar to Gmail's "labels" or del.icio.us tags. Any contribution welcome!
Written in C++, IFI-picloader is a US First Competition Linux port for Innovation First Inc. Robot Controller programmer using a pic 18F8520. It writes MCC18 compiled hex files to PIC and allows users to program under *nix based operating systems.
The MP4Free project provides a simulation, analysis and exploration platform for multi-processor system-on-chip applications at variable level of abstraction, providing also a comprehensive component library.
DesktopTools is a collection of small utillities which help to make your daily life easier. Since the tools themself are rather small (projectwise) I keep them not as individual projects, but have them under this collective name.
TORCH is a web enabled electronic health record (EHR) application. TORCH is usable in single practitioner offices and scalable up to multi-site practices.
Dowser is a research tool for the web. It clusters results from search engines, associates words that appear in previous searches, and keeps a local cache of all the results you click on in a searchable database. It helps you keep track of what you find.
Affymetrix GeneChip Operating Software (GCOS) is used to control Affymetrix Microarray scanners and fluidic stations. Using the DCOM API, this project provides programmatic scripting of GCOS using Python.
Rana, Restriction Analysis Libraries.
Rana is written in Python and provides a set of libraries and scripts to work with restriction enzymes and ADN. The aim is to ease the development of molecular biology software for research or education purposes.
PyExp is a Python framework to develop programs driving physical experiments, dealing with Physical Elements in the high layer and translating this into actions on devices or groups of devices on the low layer.
IMOOSE is intended as a general purpose application framework for the
development of Finite Element solvers and related tools. It mainly focuses on
electromagnetic problem arising from the design of electrical machines.
pyCatalog is a Python, MySQL, wxPython, Reportlab application specifically usable in library and information centers. It simply produces book catalog and card catalog in pdf format rendered using reportlab. The program takes MARC file as its source data.