Search Results for "python-dpkt" - Page 17
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Showing 2442 open source projects for "python-dpkt"
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EasierMGF
Converts RAW Thermo Files into MGF files
Converts RAW Thermo Files into MGF files (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/easiermgf3/code/ci/default/tree/README.md - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., & Abian, J. (2014). A collection of open source applications for mass spectrometry data mining. -
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TagCalc
Calculates groups of aminoacids that adjust to a mass difference
Calculates groups of amino-acids that adjust to a mass difference (Python 3 version). -
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KimPeptid
Analyzes Peptides Properties (Python 3 version)
Analyzes Peptides Properties (Python 3 version). For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/kimpeptid3/code/ci/default/tree/README.md -
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TCellXTalk
TCellXTalk Web-App from LP CSIC/UAB
TCellXTalk is a comprehensive database of experimentally detected phosphorylation, ubiquitination and acetylation sites in human T cells. The web-app at www.TCellXTalk.org makes TCellXTalk accessible from Internet, and enables the in silico prediction of potential co-modified peptides to facilitate their experimental detection, using targeted or directed mass spectrometry, for the study of protein post-translational modification cross-talk. More detailed information on TCellXTalk and... -
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xMariner
xMariner automates the analysis of MALDI spectra and report generation
xMariner automates the analysis of MALDI spectra and report generation -
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Xtraq
Xtraq extracts iTRAQ data from .ANZ Peaks results files
Xtraq extracts iTRAQ data from .ANZ Peaks results files. -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta,... -
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LymPHOS2
LymPHOS2 Web-App
LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes... -
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HyLiTE
Hybrid Lineage Transcriptome Explorer
HyLiTE (Hybrid Lineage Transcriptome Explorer) analyzes high-throughput transcriptome data from allopolyploid species. Allopolyploidy describes the formation of a new hybrid organism from the union of two or more different parents. Allopolyploid species carry multiple copies of each gene (homeologs), which often exhibit unusual expression patterns. Homeolog expression levels can technically be determined from next generation sequencing data (RNA-seq), but in practice, assigning reads to... -
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Coronavirus Tracker API
API for tracking the global coronavirus (COVID-19, SARS-CoV-2)
Provides up-to-date data about Coronavirus outbreak. Includes numbers about confirmed cases, deaths and recovered. Support multiple data sources. Specify source parameter with ?source=nyt. NYT also provides a timeseries! To view timelines of cases by US counties use ?source=nyt&timelines=true. Currently, 3 different data sources are available to retrieve the data. Worldwide Data repository operated by the Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE). U.S.... -
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Piko stats
Piko solar inverter data communicator and manager
Piko solar inverter interface. Get online real time data and status. Get also history data. Database management of data. Exports, graphs, ... Manage data and stats using a SQLite or MySQL database. Third party intergration. See the Wiki home page for more informations. -
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Tux Math Scrabble
12÷16×3=9÷4
Latest version 0.9.1 runs on Python3. Date: June 15, 2023 Online/touch-screen version: https://www.asymptopia.com/tuxmathscrabble Encourages kids to construct compound equations and consider multiple abstract possibilities. -
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PyZgoubi is an interface to the Zgoubi particle tracking code written in python. It aims to ease the use of Zgoubi by providing a simple interface to create beam line elements and particles, and to automate running and analysing of simulations.
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calculate-curie
Calculates Curie temperature for honeycomb/hexagonal materials
Program to calculate Curie temperatures for hexagonal and honeycomb materials, as described in *2D ferromagnetism at finite temperatures under quantum scrutiny* by *Joren Vanherck, Cihan Bacaksiz, Bart Sorée, Milorad V. Milošević and Wim Magnus*. -
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APBS
Biomolecular electrostatics software
This software has moved to http://www.poissonboltzmann.org/. -
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Hénon map browser
Program for exploring the Hénon attractor
A Python program for exploring the Hénon attractor. For an explanation of what the Hénon attractor is please see Wikipedia (http://en.wikipedia.org/wiki/H%C3%A9non_map). With this program you can draw the Hénon attractor and interact with it in various ways. You can zoom in by selecting an area, vary the Henon parameters manually and even make animations with them. -
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QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
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An Open Source IEC 61131-3 Integrated Development Environment, providing PLCOpen SoftPLC programming, CanOpen IO's, and SVG based HMI.
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DESC Pro
Discrete event simulation for solar cell production
The aim of the DESC Pro program is to try to capture the dynamics of modern solar cell production lines using discrete event simulation techniques. All process and transportation events within the whole line can in principle be included in the simulations, which gives the advantage that dynamic aspects such as planned maintenance and random micro-stops can easily be taken into account. -
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SCiDA Pro
Program for solar cell production data analysis
The purpose of the SCiDA Pro program is to help with processing solar cell production data. It has the following features: - Able to handle large data sets in a fast way (e.g. plotting 100k cell data takes a few seconds) - Easy data filtering - Easy generation of a data summary report - Extensive data plotting features - Cross-platform (Windows/Linux/MacOS) - Supports multiple languages -
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OpenMultiphysics
Application Integration for HPC Multiphysics
The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities. Design and development in this project is driven by the Consortium for Open Multiphysics. Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT -
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epidaurus
tumor epigenetic database
Epidaurus is a collection of epigenetic datasets including transcription factor ChIP-seq, histone ChIP-seq, DNase-seq, FAIRE-seq, DNA methylation, etc. It also includes commonly used genome features (GC content, conservation) and RNA-seq. A user friendly interface has been developed to interrogate and visuzlize these datasets. -
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PBTK Optimizer
Application for optimization of parameters in PBTK models
Physiologically based toxicokinetic (PBTK) modeling offers great promise in environmental risk assessment, potentially speeding up dose-response studies while minimizing animal testing. Some limitations exist in the PBTK field, such as difficulty of model development and a lack of application specific software tools to help modelers. Some parameters used in PBTK models, such as tissue weights, are easily measure. Other parameters can be determined through in-vitro experiments or through... -
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The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
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PiTherm
A CPU Temperature display for Raspberry Pi
Read the temperature, display it on this neat little 10-LED muticolor array. The array has, in order, BGGGGYYYRR LEDs. This first version is a trivial program that scans the CPU temp and uses 10 GPIO pins, one for each LED.
