Showing 310 open source projects for "file"

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  • 1
    This software screens a given peak list against web based NMR databases (nmrshiftdb, HMDB...) and return possible molecules. It also take a given molecule to return expected peaks list.
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  • 2
    Maximal Clique Motif Reduction (MCMR) is a software program for running and then combining the output of multiple motif finder programs, such as MEME, AlignACE and Weeder, into a set of consensus predictions with associated confidence rankings.
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  • 3
    SuperG is a code library written in Python intended to quickly enable programmers in a scientific environment to manage data files created by dispersed scientific instrumentation.
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  • 4

    OCFit

    Python package for fitting of O-C diagrams.

    Python package OCFit includes 4 classes for analysis and fitting of O-C diagrams of Eclipsing binaries In a case of using this package for scientific purposes, please, cite our paper Gajdoš & Parimucha (2018) where you can also find more detail description about fitting functions and used models. For install it, download/clone this repository or download suitable binary file from releases. Not working yet! The first release comming soon... Requirements numpy matplotlib PyAstronomy pymc Installation is possible from source code or using build installation binary file (only for OS Windows). The following procedure is only for installation from the source code. Extract files and go to new-created folder. ...
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  • 5

    PLGS Assistant

    Easing the identification of high quality PLGS identified peptides

    This software tool assists in the identification of PLGS identified peptides that provides high quality HDX information. The output file is formated so it can be directly imported into DynamX. This tool requires that the user has python installed.
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  • 6
    This is a collection of Python functions, with which data can be exported from the Python environment to a file which can be viewed in GoogleEarth.
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  • 7

    geoscipy

    Python-accessible toolkit for Geoscience & Remote Sensing Applications

    ...Functions include reading/writing of many data formats, images, vectors, ..., and processing of images, vectors, ... including map projections, ... The library is written C, using HDF5 as the file format for storage of all remotely-sensed data and ancillary data, as well as processed data. The C functions assume a particular format for the HDF5 file contents, and provide functions for reading and writing data to such files. There is also a Python API that provides a procedural as well as an object-oriented interface to these functions. ...
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  • 8
    PyAero

    PyAero

    CFD Toolkit

    PyAero is a toolkit developped at andheo for CFD software : post-processing, curve generation, … Currently PyAero focuses on ONERA's code "Cedre". PyAero is powered by Qt, Python, PySide, enthought and pyLot.
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  • 9
    ...Among trimAl’s additional features, trimAl allows getting the complementary alignment (columns that were trimmed), to compute statistics from the alignment, to select the output file format , to get a summary of trimAl’s trimming in HTML and SVG formats, and many other options.
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  • 10

    GenEpiO

    The Genomic Epidemiology Ontology covers food-borne disease terms

    ...The project files are currently hosted at https://github.com/GenEpiO/genepio/ . Here we provide the genepio-consortium@lists.sourceforge.net listserve. Terms for these subdomains have partially been implemented in the main file, **genepio.owl**, which imports terms from over 25 OboFoundry.org ontologies. Also we have added a number of terms that so far haven't been covered via OboFoundry. Recognizing that GenEpiO encompasses many domains, we are advocating a consortium approach for enhancing its content via interested parties that need particular domain terminology.
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