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Biomedical Information Management System (BIMS) is a modular multilayer object - oriented software architecture, which provides a flexible computational solution to capture and manage a heterogeneous biomedical data: textual and visual information.
The Princeton Protein Orthology Database (P-POD), developed by the Genome Databases Group at Princeton, computes and displays families of orthologs between multiple organisms.
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An online database project with database and web interface to archive, manage, search and download individual-based life history data that have been collected from wild primate populations.
Protein Data Bank transformed into an SQL database with a very powerful search engine and a rich web interface. The engine combines chemical, sequence and 3D structure searches. The interface provides statistics, sequence and 3D structure alignments.
A web-based system for a comprehensive survey of water utility customers. Cross-platform
application written in PHP. Uses a GIS component based on mapserver to visualize the delivery points.
FunctSNP is an R interface to an SQL database for linking single nucleotide polymorphisms (SNPs) to functional knowledge. FunctSNP should work on any OS on which R runs.
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The aim of Argos viewpoints server project is to propose a new standard protocol for community-driven organizations of knowledge, and make the collaboration possible beyond the boundaries of the software and of the resulting communities.
ReliaFree is a Python and PyGTK based suite of tools to assist in Reliability, Availability, Maintainability, and Safety (RAMS) analyses. ReliaFree is intended to be an OpenSource alternative to proprietary RAMS analyses solutions.
This project is discontinued. If you would like to take on the maintenance, please contact me at https://mastodon.social/deck/@mrtmd
Open Bioprocess Monitor aims to be opensource remote monitoring system for bioreactors. System (written in php) can display all available data in a web browser. Currently system has been built as a proof of concept for educational purposes.
An SQL handler to interface multiple databases data to the OpeNDAP Hyrax (BES) server. Written in C++, it uses unixODBC to query DB and can be dynamically extended to use proprietary ODBC API driver in many easy ways. It is bundled with scripts to ge
TeNeM (Telecommunications Network Model) is a PostgreSQL schema with PL/pgSQL functions and triggers intended to make with a fiber optic network management. It is also a GIS JUMP plug-in to edit and visualize the data. PostGIS is used to extend Postgre.
ViSoR provides a visualization of several social indicators, statistics and crimes for the Ruhr Area in Germany. It allows users to view and compare particular suburbs or regions in this area.
Decima is a database that was designed to support time-series data mining. It consists of PostgreSQL custom type definition, implementation of GiST index for that type and snowflake database schema.
Goal of our project CSX (City Stats X) is to program a generic interface to visualize and present social data about a city. We will present this on the example of the city of Linz in Austria.
SCAMPI is designed to rapidly detect molecular markers in silico through sequence comparison. For this purpose it creates a unique workflow integrating third party tools like NCBI Blast or Primer3.
The application Crimeblips provides up-to-date crime statistics for Berlin (Germany). It maps and visualizes crimes, allowing users to identify crime hot spots, trends and general patterns. Bayesian algorithms are used to extract relevant information.
Celsius is a data warehouse that provides web services for upload, archival, download, annotation, quantification, and normalization of all Affymetrix microarray platforms.
GTdb - Modular genotype database for all markers. The
database has core which captures information common to different
variation measurements and extensions to method and instrument
specific data.