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Mediboard is a web based open source system to manage Healthcare structures. The system is a based on a web multi-layers architecture to manage various interconnected modules, using PHP, XML, XHTML, Javascript, CSS, Smarty and PEAR.
lib_data_io is a set of PHP libraries designed to easily move complex sets of data between PHP array data structures and a variety of sources and destinations including JSON, XML, ICAL, MySQL, HTML, Trac WIKI, text, LDIF, and plot images.
A system for automated analysis and data handling for RNAi screens
The iBRAIN2 software system for RNAi high-content screening integrates automated analysis and customizable data management.
It enables robust and complex parallel processing on computer cluster infrastructure and allows for reliable storage of primary and resulting data sets.
The Generic Genetic Studies Database (GGSD) is a web-based, relational database driven data management software package for the management of large scale genetic studies.
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PheMaDB is a web-based data management system to store and analyze OmniLog Phenotype Microarray data. The manuscript can be accessed here: http://www.biomedcentral.com/1471-2105/12/109. Chang WE et al. BMC Bioinformatics. 2011 Apr 20;12(1):109.
GOCART is a modular open-source application used to assemble biological sequences into Gene Ontology (GO) annotated contigs for Web GUI visualization based on their corresponding hierarchal GO structure, described by the Gene Ontology Consortium.
ViSoR provides a visualization of several social indicators, statistics and crimes for the Ruhr Area in Germany. It allows users to view and compare particular suburbs or regions in this area.
"Plasmidb" is a database management system (RDMS) used to manipulate, view and store molecular biology information rapidly and easily. Editable information includes: constructed plasmids, clones, standard vectors, primers, antibiotics, enzymes and more
SURFnet IDS, a Distributed Intrusion Detection System (D-IDS). The goal is to provide an early warning system which lets system administrators correlate known and unknown exploits to attacks directed towards their networks.
The project is based on the experience carried out in the University of Padova where at the end of 1997 we have choose to create one Computer science Unit inside of Department of Medical and Sciences and Special Therapies to develope Radiological OSS.
phpWeatherMap is a set of php scripts to generate weather maps for (almost) every country in the world. You can easily download new maps and integrate them into phpWeatherMap. Map and weather data is available for free on the net.
A web-based system to register the advertisement panels on the roads. Cross-platform application written in PHP. Uses a GIS component based on mapserver to visualize the panel locations.
EasyRefDB is an online tool for storing, retrieving and searching references to scientific papers. The scientific papers currently handled by the tool are related to computer science but can be easily extended to other topics.
Integrate large databases of points with Google Maps without overloading db or client browser. Server-side example in simple PHP with server & client side caching, easily portable. Data loaded in chunks and when zoomed an area overview is shown. Simple D
Web-based AJAX tool for creating diagrams of icons and links between them. Features include Google Maps & Google Earth integration, configurable tool palettes, and automated palette generation from a Google Local query.
GeoClass for PHP provides classes to handle georeferenced data. Features are: circumference search in (relational) databases, handlers for NIMA-DB and openGeoDB, distance calculation, creation of maps from .e00 or .ovl files and more (rdf, soap, etc).
A PHP class library for the Open Archives Initiative Protocol Metadata Harvesting. This library provides a Server (= Repository) as well as a Client (= Harvester) interface. This package is conformant to and makes use of PEAR classes.
The code in this project is incomplete and buggy in parts. It has been superseded by the math packages I wrote for PEAR (pear.php.net). Use those instead (see the Math section of the packages list). -- Jesus M. Castagnetto