Showing 5 open source projects for "translator algorithm java"

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    BD-Func

    Bidirectional Functional Enrichment of Gene Expression Data

    BD-Func is an algorithm to predict activation or inhibition of pathways based upon gene expression patterns. If you use BD-Func, please cite: Warden C, Kanaya N, Chen S, and Yuan Y-C. (2013) BD-Func: A Streamlined Algorithm for Predicting Activation and Inhibition of Pathways. peerJ, 1:e159
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  • 2

    COHCAP

    City of Hope CpG Island Analysis Pipeline

    COHCAP (City of Hope CpG Island Analysis Pipeline, pronounced "co-cap") is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). Please note: 1) The SourceForge version of COHCAP is no longer being updated. Please see the GitHub version: https://github.com/cwarden45/COHCAP This was the source repository for the Bioconductor version, with some changes after the decision to only provide the code through...
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  • 3
    FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.
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  • 4
    CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
    Downloads: 1 This Week
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    Award-Winning Medical Office Software Designed for Your Specialty

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  • 5
    A collection of implementations of the Lovins stemmer as described in "Development of a Stemming Algorithm" by Julie Beth Lovins (published in "Mechanical translation and computational linguistics", 11:22-31, 1968).
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