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RefDB is a reference database and bibliography tool for SGML, XML, and LaTeX documents, sort of a Reference Manager or BibTeX for markup languages. It is portable and known to run on Linux, Free/NetBSD, OSX, Solaris, and Windows/Cygwin.
Gpsdrive is a car (bike, ship, plane) navigation system. Displaying your position on a map and a lot of other functions are implemented. It works with vector maps from http://www.OpenStreetMap.de/
GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features
A database of linguistic annotation of medical text (from MEDLINE), including corpora used with ABGene, BioCreative I and II, and the MedPost training corpus.
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CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
EdgeExpressDB (eeDB) is a federated data abstraction system designed for integrating, interpreting, and visualizing very large biology datasets. It is designed for scaling beyond Petabytes and 10^13 objects. http://fantom.gsc.riken.jp/4/edgeexpress
ORPAL is a reference manager utilizing a relational database. The interface focuses on easy searching, note-taking, and electronic article storage, but also supports traditional citation and bibliography management (in APA and MLA formats).
Genome Properties is a system for asserting specific structures, pathways or systems are present in a genome to provide high-level conceptual descriptions of genomic content.
Biospha is a suite of perl scripts based on bioperl toolkit intended to help researches to manage large sequence file. With BIOSPHA you can classify each sequence according to the NCBI taxonomy. You also can get all taxonomic info from a GI or Taxid.
ProcessViewBrowser & ProcessViewServer represent an OpenSource attempt to industrial process visualization. It is based on Qt and is very portable. (Now also available as commercial software)
Document Archive is a web-based database to help you keeping track of the vast amount of electronic documents and BibTeX entries you might have in use.
Browser plugins and console frontends are developed to allow fastest access with typical tools.
Web Based Hospital Information System i.e for quality assurance (bedsore, decubitus ulcer) in Germany. Written in Perl and tested on MySQL. Works with HTML templates. Easy to modify. Available from any workstation through a Browser. Modular and scalable.