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RefDB is a reference database and bibliography tool for SGML, XML, and LaTeX documents, sort of a Reference Manager or BibTeX for markup languages. It is portable and known to run on Linux, Free/NetBSD, OSX, Solaris, and Windows/Cygwin.
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting...
Next Gen Cloud Management System (NG-CloudMS) is a new web based end-to-end OCX management tool that is distributed by Opt/Net under GNU Public License (GPL).
This prototype provides near real-time visibility of the networks and cloud infrastructures and interconnected computing and data storage resources. It therefore can assist the operators with visualisation and localization of the causes of potential incidents.
G.R.E.A.T. - Google Earth Reporting Engine and Analysis Tool The Goal of this project is to create a basic IDS interface with Google Earth. Currently generates a KML file of traceroute/whois information suitable for use in Google Earth
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ValiTerms is a tool that helps the validation of terms in corpus. It finds their occurrences and allows terminologists to choose if a term is relevant or not. ValiTerms is developed at LIPN (http://www-lipn.univ-paris13.fr), RCLN team.
Please consult the wiki for instructions about installation and usage.
PHPXref is a developers tool, written in Perl, that will cross reference and extract inline documentation from a collection of PHP scripts. It generates simple HTML output suitable for browsing offline.
HomGL is a web-based tool for comparing gene lists obtained e.g. by
microarray studies. Unigene, Locus Link & Homology databases are used
to compare gene lists with different accession numbers and between different
organisms.
A database driven PHP based web site designed to provide a performance analysis tool of DICOM picture archiving traffic. This tool is designed for PACS administrators working in a hospital environment trying to understand their performance bottleneck. T