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Showing 47 open source projects for "folder"
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Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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$300 Free Credits for Your Google Cloud ProjectsLaunch your next project with $300 in free Google Cloud credits—no strings attached. Test, build, and deploy without risk. Use your credits across the entire Google Cloud platform to find what works best for your needs. After your credits are used, continue with always-free tier services. Only pay when you're ready to scale. Sign up in minutes and start exploring.
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FlyByWire Simulations A32NX
The A32NX & A380X Project are community driven open source projects
...Our custom-built, open-source installer is where we keep our projects for you to easily install. Pick which branch you want to install, and the installer will automatically download it into the proper folder. -
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PaperQA2
High accuracy RAG for answering questions from scientific documents
...See our recent 2024 paper to see examples of PaperQA2's superhuman performance in scientific tasks like question answering, summarization, and contradiction detection. In this example we take a folder of research paper PDFs, magically get their metadata - including citation counts and a retraction check, then parse and cache PDFs into a full-text search index, and finally answer the user question with an LLM agent. -
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OpenFermion
The electronic structure package for quantum computers
...However, for those who would like to use Windows, or for anyone having other difficulties with installing OpenFermion or its plugins, we have provided a Docker image and usage instructions in the docker folder. The Docker image provides a virtual environment with OpenFermion and select plugins pre-installed. The Docker installation should run on any operating system. -
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Cookiecutter Data Science
Project structure for doing and sharing data science work
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. When we think about data analysis, we often think just about the resulting reports, insights, or visualizations. While these end products are generally the main event, it's easy to focus on making the products look nice and ignore the quality of the code that generates them. Because these end products are created programmatically, code quality is still important! And we're not talking... -
One App to Replace Your Entire SaaS StackClickUp replaces your scattered tool stack with one AI-powered platform. Stop paying for project management, docs, chat, and time tracking separately when they all live in one place. Teams that consolidate into ClickUp cut software costs and move faster because everything is connected, not siloed across apps that don't talk to each other.
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Doctor Dok
Doctor Dok is an AI based medical data framework
...Convert all your Blood Tests, MRI Scans, TK Scans, Visit reports, and Hospital Admission Reports to JSON, safely store in the cloud, and discuss, annotate, and translate them with AI. Doctor Dok is a secure storage, digitization, sharing, and AI discovery platform for all your family and/or folder health data. All health history - digitalized - accessible anywhere from Mobile or Desktop. Using AI you may translate your health records to one of 50+ languages - making abroad health services more accessible. Doctor Dok uses AI to OCR even a hardly readable photo of your health documents. Then stores it in the cloud with Zero Trust Security architecture (nobody but You can decrypt the data). -
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A Matlab toolkit for all aspects of EEG/ERP analysis, especially PCA. If you run into a problem, please send me a note and I'll fix it. The tutorial pdf is in the documentation folder and the tutorial data can be downloaded from a link provided by the pdf. The tutorial file has full install instructions. For all platforms supported by Matlab.
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Zgoubi is a raytracing code. Since 1972 it pushes charged particles through accelerators and beam lines, by stepwise solution of Lorentz force equation - and their spins via Thomas-BMT differential equation. Zgoubi simulates beam dynamics and polarization in a variety of accelerators (storage ring, synchrotron, cyclotron, betatron, microtron, FFAG, multi-pass ERL, etc) and optical systems (beam lines, magnetic and electrostatic optical components, time-of-flight and mass...
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DxTonia
A tool for detecting the presence of leg dystonia from videos.
...Note: Currently only works on Windows PC with Nvidia GPU. Soon, mac and Linux CPU only version will be released. The requirment files are in old-version_scripts folder. Instructions to use DxTonia https://www.rishabh-bajpai.com/dxtoniainstallation https://www.medrxiv.org/content/10.1101/2024.10.15.24315574 -
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pineTERM: Free In-Browser UART Terminal
Easy-to-use, powerful web/browser UART terminal, no installation req.
A modern, stand alone browser-based serial terminal for UART communication with microcontrollers, embedded devices, and IoT hardware. No installation required - just open in your browser and connect to your serial device. Just unpack the zip file into local folder and open index.html in Chrome/Edge/Opera. Works on Windows/Linux/MaOS -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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MANTI
MANTI - Mastering Advanced N-Termini Interpretation
...The central anchor for the data congregation is the modificationSpecificPeptides.txt or diann-output.pr_matrix.tsv file - additional data is inferred from different other source files from the corresponding folder. Maybe also useful for normal proteomics purposes but this script is heavily optimized for protein neo-termini identification and validation. A graphical interface is available as Yoğurtlu_MANTI (a Perl/Tk script) + execut. application versions for Win1x without the need to have Perl installed locally. For a very detailed explanation of script parameters and the evaluation strategy, please consult the extensive manual PDF -
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Qgama
Adjustment of local surveying networks, binary builds for Windows
...The most simple case is Sqlite3 file database, which does not need any special knowledge from the user. http://www.gnu.org/software/gama/qgama Command line program gama-local is distributed with Qgama in folder bin. -
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remove the temporary files using Temp manager, and automate the operation (remove the files every 5 seconds). Built with python. Interface : Tkinter.
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Hedgehog Lab
Run, compile and execute JavaScript for Scientific Computing
Hedgehog Lab is an open-source scientific computation tool in the browser. Before the development, Pleases make sure you are already installed and enabled the yarn. Once cloned, switch to the dev branch and navigate to the folder by typing cd hedgehog-lab and then running the provided commands. On each run the program compiles and it takes time. Please wait until it shows "Compiled successfully!" and instructions about with which IP:PORT to connect. -
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TVscript
Exploration of the removal of count variable transcripts.
> See TVscript wiki: https://sourceforge.net/p/tvscript/wiki/Home/ Related Software: 1. CStone: https://sourceforge.net/projects/cstone/ 2. CSReadGen: https://sourceforge.net/projects/csreadgen/ 3. CView: https://sourceforge.net/projects/cview/ 4. ChimSim: https://sourceforge.net/projects/chimsim/ 5. TVScript: (See wiki) 6. SeQuester: https://sourceforge.net/projects/sequester/ 7. TreeScope: https://sourceforge.net/projects/treescope/ -
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StatisticsTables
This is a Java APP for Probability and Statistics Tables
...After saving Windows file, just click the jdistabs_win.exe file to install. If you use OS X for MAC, download to the Download directory in the Finder. Then copy to the Desktop folder. Click on the jdistabs_osx.zip to unzip. In the jdistabs_osx folder that is created, create an alias file from the jdistabs_osx.jar file and drag it to the Desktop. Click the Desktop file to start the program. -
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chethermo
Software for Introductory Chemical Engineering Thermodynamics
...If you are a 'user', then you want to download the archive from 'Download' icon or the 'Files' link. If you want the latest version of a particular file, then use the 'Code' link and look in the 'trunk' folder for the main development and 'branches' for any side projects. Please note that the 'Files' releases are periodic, and that the 'Code' files may contain development files or code that is different from the 'Files' content. -
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Transistor
Exploiting Mox Software "Bipolar Transistors" database
It requires db.sqlite database and images folder containing transistor's implementation pin Bipolar Transistor Database from Mox Software is not available anymore. As on many download websites it was mentioned as open sources (but no source available) I decided to rebuild if almost from scratch. As a transistor database may be useful i decide to share what I've done. It has been written in Purebasic because IDE is free till 800 lines of code written, and mainly because it's very portable with a lot of library embedded. -
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MANTI.pl / muda.pl
muda.pl - MQ unified data assembler
...The central anchor for the data congregation is the modificationSpecificPeptides.txt file - additional data is inferred from different other source files from the MaxQuant txt folder but the starting point for the data assembly is solely the modificationSpecificPeptides.txt file. Maybe also useful for normal proteomics purposes but this script is heavily optimized for protein neo-termini identification and validation. For a more thorough explanation of script parameters and evaluation strategy, please consult the extensive manual PDF. -
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
... * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018). * PubMed ID: 29562348 * DOI: 10.1093/nar/gky175 -> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. LINUX, MAC OR WINDOWS SPECIFIED FOLDER) TO ALLOW THE PROGRAM TO FIND THE PREDESIGNED DATA. * UPDATE NOTE: -> Sep-1-2020: add an update for Ubuntu-20.04. You will need Boost library installed (sudo apt-get install libboost-all-dev) -> Mar-7-2018: revise header terms in the output file -
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qsdata
Spectral Data - binary builds for Windows 10
Small Qt based experimental program for processing spectral data. Example data are available from Files/example-data folder. -
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SODLS
Self-orthogonal diagonal Latin squares.
Makes self-orthogonal diagonal Latin squares, SODLS, for all valid orders, (that is, not order 2, 3, or 6). Input is an order, (one number), or an order range, (two numbers separated by white space). Output files are in folder SODLS[_n]. Each file contains a SODLS followed by a magic square. The magic square, M, is made from the order N SODLS, Q, and its transpose, as: M[row][col] = N x Q[row][col] + Q[col][row] + 1 See http://budshaw.ca/SODLS.html http://budshaw.ca/addenda/SODLSmethods.html http://budshaw.ca/addenda/SODLSnotes.html http://budshaw.ca/Download.html#sodls -
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DoseInHumanBody
Patient dose from medical X-ray and other sources
...This package does not contain all data required to run, i.e. does not contain GEANT4 libraries and GEANT4 nuclear data (for saving space). It does contain however the X-Ray spectrum data. Read README.txt me inside Build folder for how to fix it. Source code included. Also, available on GitHub: https://github.com/ZiliasTheSaint/DoseInHumanBody.git -
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DetectorCalibration
Peak and global efficiency of radiation source-detector equipment
...Due to the nature of Monte Carlo simulation technique, all geometries involved must be well known for accurate results! Can be used along with RadiationHelper (Beta_Gamma_MC module with Geant4 checkbox selected) but make sure that inside RadiationHelper folder there is MonteCarloPath.txt file having the first line pointing to the path of detector.exe folder (e.g. D:\\DetectorCalibration\\Build) and, if on Linux, next lines pointing to the Geant4 data. RadiationHelper is found here: https://sourceforge.net/projects/radiationhelper/ Source code included. Also, available on GitHub: https://github.com/ZiliasTheSaint/DetectorCalibration.git -
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Viwks
An application to download information on websites periodically.
...First you create a new 'task', then you select the URL and click on the 'load page' button, after you close the new window you can rename the task, choose the interval, choose the tag and so on, after that you click 'save'. Back at the main menu you can select the 'task' you want, select an output folder and hit 'run'. It's that simple.
