Search Results for "collections"
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Showing 28 open source projects for "collections"
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COLMAP
Structure-from-Motion and Multi-View Stereo
COLMAP is a general-purpose Structure-from-Motion (SfM) and Multi-View Stereo (MVS) pipeline with a graphical and command-line interface. It offers a wide range of features for the reconstruction of ordered and unordered image collections. The software is licensed under the new BSD license. -
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Continuation Core and Toolboxes (COCO)
Toolboxes for parameter continuation and bifurcation analysis.
...Documentation and tutorials are available for the following toolboxes: * ep : continuation and bifurcations of equilibrium points * coll : continuation of constrained collections of trajectory segments, including multi-segment boundary-value problems * po : continuation and bifurcations of periodic orbits in smooth and hybrid systems * recipes : collection of examples from the book Recipes for Continuation -
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TXM
Unicode XML TEI text analysis platform
TXM is a free and open-source cross-platform Unicode & XML based text analysis environment and graphical client, supporting Windows, Linux and Mac OS X. It can also be used online as a J2EE standard compliant web portal (GWT based) with access control built in. DOWNLOAD LATEST VERSION OF TXM : http://textometrie.ens-lyon.fr/spip.php?rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP... -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting ratio or reporting odds ratios) and export to spreadsheets programs like Microsoft Excel or statistics programs like R. ... -
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Specify Software
Biodiversity Database Platform
...In 2015, 450 biological collections worldwide use Specify Software for collections data management. An iPad app, Specify Insight is also available. -
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ScienceFair
The futuristic, fabulous and free desktop app
ScienceFair is an open-source, decentralized science publishing platform designed to make scientific knowledge universally accessible, transparent, and censorship-resistant. Built as a desktop application, it allows users to read, search, and share scientific papers using peer-to-peer technologies like IPFS, removing reliance on centralized publishers or servers. ScienceFair is particularly well-suited for researchers, educators, and open science advocates who value permanent access to... -
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Applications to support the efficient capture of data from natural science collections specimens (particularly entomological collections), by facilitating pre-capture of data reflecting the storage structure of the collection, imaging of the specimens to separate data capture from specimen handling, and community sourcing transcription of hand written label data. Designed and written by a team at the Museum of Comparative Zoology.
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S2O
Converting IBM SPSS files to CDISC ODM
This tool can be used to convert data collections based on IBM SPSS Statistics to the data standard for definition and exchange of clinical trials: CDISC ODM (Operational Data Model). Possible use-cases: - A project is running out of funding and scientific data collection should be performed in free available/open-source data capture systems - Advantages of reliable EDC systems like: Data security (role/right management), backup infrastructure, support of the entire clinical trial lifecycle, traceability of data (who has when entered what data or changed to what value with what reason) and compliant to regulatory requirements... -
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TOVAL: Toms Java Library
Library with classes for common programming issues.
TOVAL comprises a set of java classes for common programming issues. It includes utils for arrays, lists, sets and collections for convenient handling and modification, but also support for mathematic definitions concerning logic (clauses + resolution) together with some algorithms for permutations, powersets and resolution. Additionally it contains a number of types for multisets, matrices with object keys and much more. -
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Library of various Java Swing user interface components, with emphasis on views and editors for complex data structures, like collections, sets, lists, maps, graphs, and matrices.
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UNSW Metadata Stores (ResData)
An institutional research metadata management repository.
ResData is an institutional metadata repository to facilitate effective management, discovery and sharing of institutional research data collections. It integrates with institutional enterprise systems, such as HR and Grant management systems to facilitate re-use of existing information, such as People and Project records. ResData has been developed by the Library Repository Services, University of New South Wales. The work was supported by the Australian National Data Service (ANDS) under its MS21 program. ... -
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Intel(R) CnC
Parallelism without the Pain
...Whether run on multicore systems, Xeon Phi™ or clusters CnC will seamlessly exploit the performance potential of your hardware. Through its portabilty and composability (with itself and other tools) it provides future-proof scalability. Intel© Concurrent Collections for C++ is a C++ template library for letting C++ programmers implement CnC applications which run in parallel on shared and distributed memory. -
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RadioAnatomy
New dimensions in interactive training of radiological anatomy
Relying on existing image collections such as the Visible Human (VHP), this project would provide an interactive teaching tool professionals and students that need training in interpretation of radiology anatomy from tomographic imaging techniques. -
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Simuquant
A quantum circuit simulator written in Scala
...It's GUI enables intuitive access and direct graphical feedback, making it useful in a classroom situation and the like. Simulation processing is done in parallel, utilizing parallel collections introduced in scala 2.9. This application has been created as part a bachelor-thesis at the Hamburg University of Applied Sciences. The thesis is available at: http://opus.haw-hamburg.de/volltexte/2012/1843/pdf/ba_dahl.pdf Future plans: - Operator grouping (enables repeated blocks) - Editable library -
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Linking Yabi with RDA
This software system enables publication of YABI workflows to the RDA.
...YABI can be used to access the NCI-SF in Bioinformatics and the tools available through the Embl Australia EBI mirror hosted at the University of Queensland. With the support of ANDS, QFAB has developed this software system to enable the publication of services and collections based of Yabi workflows and datasets. By sharing the description of their workflows, scientists facilitate the diffusion and re-use of their data. This website provides access to the workflows and datasets that have been made public. By login in, scientist can edit, manage and publish their collection descriptions to the Research Data Australia. -
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RssGsc (Rank Sum Statistics for Gene Set Collections) is a bioinformatics tool used to find meaningful gene sets using a ranked list of genes (obtained form an experiment).
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Plexus is a Java library with specifications and implementations for generic graph data structures. Like the Java Collections Framework, vertices and edges are containers for arbitrary user-defined objects.
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primeHandle is a set of data management tools in support of the PrIMe Initiative (http://primekinetics.org). primeHandle includes graphical user interfaces for searching through data collections, editing and submitting data to the PrIMe Data Depository.
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HZL Beta 2 is the updated version of a software application based on MS-Access, designed to manage and digitize botanical and zoological collections.
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HZL is a computer application based on MS-Access, designed to manage and digitize botanical and zoological collections. Credits and further information about Herbar-Zoorbar Ligero in its website: http://www.gbif.es/hzl/hzl.php
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A collection of miscellaneous Java utilities, including a standard enumerated type base class, multithreading utilities, graph utilities, and several generalizations / augmentations of the Java Collections API (e.g. MultiMap, ListDiff).
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BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.
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pubmgr is a Web based Content Management System (CMS) that stores, organizes, and provides access to scientific publication collections.
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Sciense Searcher is a system that lets you search, organize and share bibliographic cites of research articles, books, booklets, collections, manuals, thesis, proceedings, technical reports, unpublished publications and misc.
