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A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file.
OpenBioGeoSim it's a open source software that simulates the stochastic origin and spread of species geographic ranges in a heterogeneous landscape. It's a free alternative based on Gary Entsminger's BioGeoSim.
ssSVMToolbox is a Java application capable of performing supervised and semi-supervised learning tasks with Support Vector Machines. It is based on Spring (http://springframework.org/), RapidMiner (http://www.rapidminer.com) and Eclipse RCP (http://eclip
BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.
The Parenthesis Classifier takes the contents of a set of parentheses and classifies it into one of several categories. It includes a parenthesized-data extractor and the classifier.
PyEPL (Python Experiment-Programming Library) is a library for coding psychology experiments in Python. It supports presentation of both visual and auditory stimuli, and supports both manual (keyboard/joystick) and sound (microphone) input as responses.
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A complete OpenCascade - OCAF based CAD framework.Note that this is not the original SALOME GEOM project but an effort to create a standalone framework based on the existing one from SALOME project, with the addition of extra functionality.
Localization system for ZigBee networks. Based on the analysis of RSSI, estimates the positions of the mobile nodes. Firmware in C for the ZigBee modules. Java service produces results in a accessible webservlet, the user can manage the WSN network.
Tidal Analysis Program in PYthon (TAPPY) uses the least squares optimization function from scipy to perform a harmonic analysis (calculate amplitude and phases of a set of sine waves) of a hourly time series of water level values.
The Decision Deck project aims at developing a generic decision aid platform composed of modular "software components". These software components implement the common functionalities of a large range of multiple criteria decision aid methods. This
"MITO - Medical Imaging TOolkit" is an open-source, Windows-based software architecture for advanced Medical Imaging. Main characteristics are: DICOM compliant, 2D/3D/S3D visualization, image segmentation and fusion, ROI, advanced 3D user interface
Open channels hydraulics is very important part of hydraulic and civil engineering. Finding critical depth in open channel flows is a basic task in this field. This is an application for calculating critical depth in open channels flow.
Game of Life 3D is an platform-independent OpenGL implementation of John Conway's Game of Life with a modern QT4 user interface. It features a random mode and different pre defined example modes.
This is a c-library that provides tools for advanced
analysis of electrophysiological data. It features
denoising, unsupervised classification, time-frequency
analysis, phase-space analysis, neural networks, time-warping and
more.
RepMiner takes a graph theory approach to the classification and assembly of the repetitive fraction of genomic sequence data. Sequence lengths analyzed by RepMiner can range from full length transposable elements to low coverage sample sequence data.
iso2l (ˈaisəutuːl, spoken isotool) is a software to calculate the isotopic distribution of a chemical formula or a amino acid chain.
The development has been MOVED TO https://github.com/binfalse/iso2l
A Matlab toolbox for performing model-free analysis of fMRI data
The mfBox is a Matlab toolbox for performing model-free analysis of multivariate data sets. It also plugs into SPM used for the analysis of multivariate brain recordings such as fMRI, SPECT and PET data sets.
This project is looking for a new maintainer!
Soil Sieve Test Analyzer is an application for analyzing results of sieve test. Sieve Test is part of Grading Test in Geotechnical Engineering that is part of Civil Engineering to classify mechanical soil behavior.
Pricem is a "Desktop Application" that implements a Mathematic Model for predicting the impact of Intellectual Property Rights in the price of drugs. This project involves organizations like Panamerican Health Organization and other entities interested