Search Results for "gnu linux" - Page 75
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Showing 6289 open source projects for "gnu linux"
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Razor is a set of Java- and JOGL-based medical image tools which can be composed into a standalone application or integrated into other medical imaging applications. Via JOGL, Razor uses OpenGL to enhance and accelerate some medical imaging functions.
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Media Cloud allows automated downloading and analysis of on-line media. It is intended to automate what was previously a tedious process of painstaking manual content analysis.
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rTRM
Identification of transcriptional regulatory modules (TRMs)
This R package can be used to identify TRMs using experimental evidence from a single ChIP-seq experiment. It combines computational predicted transcription factor (TF) binding sites, gene expression and protein-protein interaction (PPI) data and use it to predict TRMs. -
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drl2g
Convert drl files to g code
This is a utility to process and convert drl files to efficient g code, which will help in drilling PCBs using a CNC. The snapshots are based on the linuxcnc axis program to visualize the results of the program using different algorithms. -
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Niah (Statistical Disclosure Control)
Niah supports k-anonymity statistical disclosure control assessments
Niah is a simple java tool for use in statistical disclosure control risk assessments. It implements the k-anonymity model of disclosure risk for data in csv in format. This work was developed as part of a PhD project at the University of Glasgow and during an internship with the Scottish Government. -
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Open Java Weather API
Java weather API that provides uniform access to different sources.
This package provides a common interface for users to access weather information from different data sources, and a skeletal implementation for data providers to quickly set up data access via Java. At a glance, the weather information is categorized into features and each feature is further divided into weather properties. Users query the data source by features or weather properties, and then receive the data as a list of weather reports. Strongly typed weather properties ensure that... -
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ClinStudyWeb is designed to provide a flexible infrastructure for managing patient and assay data from clinical studies. It uses a plugin system for study-specific web forms and arbitrarily complex test classifiers, and supports XML import/export.
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KYM is a MATLAB / GNU Octave set of functions that implements a wavelet-based automated procedure of quantification and characterization of biological signals. In particular it has been thought for the analysis of the oscillatory component of cytosolic calcium concentration time course.
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javadbchem
A universal chemistry database system, using Java and any rdbms
This projects provides a mechanism which saves chemical structures to a rdbms. Everything is written in Java and is independent from the rdbms used (first tested system is mysql, tweaking might be needed for others). The chemistry is handled using Chemistry Development Kit, this is proven code. The system holds atoms and bonds as entities in the rdbms, this makes it possible to have properties recorded using foreign keys and referential integrity. Apache Torque is used for database access.... -
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X-Freq
X-Ray Reflectivity Frequency Analysis
Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques. -
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LAVA for AFM
Lloyd's Algorithm-based Volumetric Analysis for AFM Images
This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of... -
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is-sfe
Information System "Supercritical Fluid Extraction"
Information System "Supercritical Fluid Extraction" has developed as tool for collecting and analyzing the experimental data from various supercritical fluids experiments. The final target is to help to scientists who worked with supercritical fluids to predict some useful properties such as density, solubility etc. In order to calculate molecular descriptors, parse SMILES and another applied purposes is used Chemistry Development Kit (https://sourceforge.net/projects/cdk). -
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5IOKeypad Arduino Library
5IO Keypad Library for Arduíno
After having some trouble configuring this little and useful Keypad for use with Arduíno, I have decided to create this library for using it easily. See the Wiki page for further details. If you install this library and find it useful, please remember to write a nice review, OK? Thank you! ;) -
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ATMSP
ATMSP - A Tiny Mathematical Speed Parser
A Tiny Mathematical Speed Parser ATMSP is a portable C++ parser for mathematical expressions like "sin(x)+y^2" e.g. These may contain arbitrary numbers of functions, variables and constants. Major design goal was minimalistic size and maximum speed. Tiny 320 code-lines offer a parser plus bytecode-generator, 26 mathematical functions and 17 supported base-types including complex and arbitrary MPFR-multiprecision. Both parser and bytecode may run in threads. The usage of ATMSP is... -
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cccutils
Clock and Control Card Utilities
cccutils provide the sources of the CCC and the CCC-Fanout. -
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ShoX is a scalable simulator for wireless networks written in Java. It is easy to install, configure and use, so that reliable and expressive scientific results can be gathered in a short time. Documentation: http://sourceforge.net/apps/mediawiki/shox
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The MPACK project is providing a multiple precision arithmetic version of linear algebra package, similar to the BLAS and LAPACK.
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cextools
Command line helpers for Conexp files.
Some small command line programs and a file parser for Concept Explorer (conexp) written in C++. Currently features include: Converters from concept explorer into PDF, PostScript, SVG and PovRay, a modified 3D Freese layout. -
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mglua
mglua stands for MathGL for Lua.
mglua is a Lua extension for MathGL. -
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abc-sde
approximate Bayesian computation for stochastic differential equations
A MATLAB toolbox for approximate Bayesian computation (ABC) in stochastic differential equation models. It performs approximate Bayesian computation for stochastic models having latent dynamics defined by stochastic differential equations (SDEs) and not limited to the "state-space" modelling framework. Both one- and multi-dimensional SDE systems are supported and partially observed systems are easily accommodated. Variance components for the "measurement error" affecting the... -
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ci-framework
the cif project
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The project offers support for NTC thermistor calculations. The Steinhart-Hart equation is a mathematical model for these thermistors. Software to calculate the coefficients based on temp-resistance tables and functions allowing conversion are provided.
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LIMS-A
Laboratory Information Management System with Complete Lab. Automation
Laboratory Information Management System with Complete Laboratory Automation. This Project is created by Fatih University Computer Engineering Students .. Hasan SARMAN Hamadou Doudoun Niangadou Feugang Kemegni Fabrice it helps to automate complete lab system. its originally created to use on a R&D lab. if you wish you can use it on every kind of labs. it comes with Client Server based Access control Mechanism which cordinate access control with registered projects. -
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FastAlign.pl
FastAlign is a perl script which uses the heuristic method of tfasty
FastAlign.pl provides a more intuitive output to find exon-intron junctions. The query string is in amino acids and the hit string is in nucleotides. There are extra nucleotides at the end of the hit string (option -diff and by default = 10), that allow to verify if the intron start with common rules (5'-GTGCGA-... for group II intron and after an exonic T for group I intron). If you have Emboss, you can genarate a graphic with option -graph 1. Dependencies: - Perl - Bioperl - UNIX... -
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openDLX
A DLX/MIPS processor simulator
openDLX is a DLX/MIPS ISA compatible pipeline simulator. (Visit https://github.com/smetzlaff/openDLX for the latest development version or if You want to contribute.)
