IDEA (Interactive Display for Evolutionary Analyses) augments PAML with a graphical interface, phylogeny reconstruction using PhyML or PHYLIP, convenient and efficient parallel processing and visualizations.
GridABM is an easy-to-use toolkit to develop high-performance agent-based models (ABMs) in Repast. GridABM facilitates large-scale simulation of ABM on multicore computers, local computing clusters, or computational grids.
Aplicación de escritorio cuyo objetivo reside en el tratamiento de imágenes provenientes de estudios de microscopía especular.
A partir de estás imágenes se aplicarán algoritmos a cada célula con el objetivo de identificar posibles enfermedades.
JFlux is a java library and graphical user interface to work with flow cytometry data. In particular, it is adapted to the COPAS biosorter and can analyze expression profiles.
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This project adds a ribbon to excel with a number of statistical buttons. This is not intended to be a full statistical analysis package (like R), but only a source for quick visualizations and calculations. For Excel2007 and up
It's a project to predict peptide fragmentation of mass spectrometry. Check the detail at Anal Chem. 2011 Feb 1;83(3):790-6. On the accuracy and limits of peptide fragmentation spectrum prediction. Li S, Arnold RJ, Tang H, Radivoja
GridSim allows modeling and simulation of entities in parallel and distributed computing systems such as users, applications, resources, and resource brokers/schedulers for design and evaluation of scheduling algorithms. http://www.gridbus.org/gridsim
Open source, cross platform drivers and function library for the NovInt Falcon Haptic Controller. These drivers are not produced by Novint Technologies, Inc. and do not come with any warranty as to their correctness or usage.
A comparative map and trait visualization framework enabling visual integration of genomic data from disparate data sources and allowing rich client-side interactivity and manipulation. Extensible through plugins for new datasources and algorithms.
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A tool to construct the metabolic networks from KEGG, and compare the constructed metabolic networks. Phylogenetic trees can be constructed along the case.
library for capturing, storing and visualizing timeseries data
The JTimeSeries has moved to github
Please go to https://github.com/JTimeSeries/jtimeseries
The SourceForge copy has not been maintained since Sep 2012
A java library to assist with capturing and storing timeseries data/metrics. Provides facilities to publish timeseries data across a network, a lightweight server to persist series data, and client user interface components for real time visualization
The goal of this project is to make an open electronic billing solution to be used by doctors in Manitoba. The software will satisfy the Manitoba Health requirement for electronic billing and provide doctors with an easy to use tool.
Mostly academic research Project about next generation computing (Software only), trying to find new ideas and solutions how computers can work in the future using technologies like voice recognition and synthesisation. Everyone is invited to join in
This program provides for easy modification and viewing of SPICE circuit files. It will also read SPICE3 RAW format (as well as GnuCap) and create graphs of results through an interactive GUI. It supports waveform math, copying to clipboard, and saving.
Graphical editor using HTML5 canvas for input of chemical structures, molecule interactions, as well as protein sequence and 3D structural motifs. Facilitates searches in chemo-informatics, bioinformatics and structural biology .
VMatrixLib is a little, handy, Java matrix library which implements a set of utility functions (such as calculus of the determinant of a matrix, calculus of the rank, inverse matrix, and many others..) that anyone who have to use matrices needs.
superseded by SgpDec http://sgpdec.sf.net Java implementation of the holonomy algorithm for the algebraic hierarchical decomposition of finite state automata.
A high-performance and ease-of-use implementation of the Modbus protocol written in Java by Infinite Automation Systems Inc.. Supports ASCII, RTU, TCP, and UDP transports as slave or master, automatic request partitioning and response data type parsing.
For commercial licenses see www.InfiniteAutomation.com
Get the most recent code here: https://github.com/infiniteautomation/modbus4j
For support: http://infiniteautomation.com/forum/category/11/modbus4j-general-discussion