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SyMBA is a Data Archive and Integrator that is based on the Functional Genomics Object Model (http://fuge.sf.net) and which archives, stores, and retrieves raw high-throughput data. See http://symba.sf.net and http://www.cisban.ac.uk
The program versusSNP is a flexible tool for mining SNPs between two close related genomes. First, we align all the orthologous genes and select SNPs, then the SNPs are separated into categories based on their mutation types.
MSA2SNP is a tool for mining SNP sites in multiple sequence alignment (MSA). This tool inherits the easy-to-use interface from MEGA4 Explorer with advance data presentation. MSA2SNP lets you visualize alignments and import from CLUSTAL program directly.
3D Genome Tuner draws circular genome map and enables viewing multi-genomes in 3D context. It also provides genome analysis and sequence alignment, making it a powerful tool in genome studies and demonstrations.
Deploy in 115+ regions with the modern database for every enterprise.
MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Daniel Farinha's personal open source repository. This is the place for Dan's sandbox, small utilities, libraries, and other personal projects at incubation stage.
VRforCAD developed in Java and Java3D API, combines two systems: Computer-aided design (CAD) system and Virtual Reality system with its special equipments for visualization and manipulation. See more at: http://www.vrforcad.org
K people is a software platform capable of integrating with enterprise systems. It enables workers to improve productivity, while giving management the the means to plan and monitor activity.
A framework built on Berkley's Ptolemy. Runs a variety of bit width optimization algorithms and suggests bit widths. Includes parsers for simulink and system generator.
Transform your applications and workflows into powerful agentic systems at global scale.
Gemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
Simple Task Execution Manager (STEM) is an OSGi UPnP service that generates events and/or performs actions on UPnP devices and services, when a set of conditions on available UPnP services or devices is evaluated true.
A set of software utilities for processing and analyzing 16S rRNA genes including generating NAST alignments, chimera checking, and assembling paired 16S rRNA reads according to reference sequence homology.
HephaisTK is a toolkit for rapid prototyping of multimodal interfaces. HephaisTK uses SMUIML, a simple markup language for describing human machine multimodal interaction scenarios and integration mechanisms.
Simple interactive Java browser is basic simple browser show how we can use voice commands to navigate in web sites and use hyperlinks as a voice commands.
This is a network simulator. This is meant to be user friendly as well as feature rich. This field lacks software with good user interface. Even the commercial softwares in this field is quite lame. This aimed to go along Multisim(R) and Blender(R) form
Virtual telescope written in Java for mobile phones. Uses CLDC1.1 and MIDP2.0. Tested on mobile phone with 2MB RAM and 60MB storage. The largest catalog uses TYCHO2(2.5M stars) and NGC+ IC(13k DSO) .Sky plotted in dark red. Has desktop version also.
Geom4J is a computational geometry library for Java. It contains implementation of the most important computational geometry data structures and algorithms coded in pure Java, designed for ease of use and optimized for performance.
Control-Center for Automation. Control your PLC's and I/O's through a Database or Web-Interface
DEPRECATED, NEW LOCATION: https://github.com/rudin-io/s7connector
Java ILP is a simple java interface to (mixed) integer linear programming solvers such as lp_solve, Glpk, Gurobi, SAT4J (0-1 ILP), MiniSat+(0-1 ILP), CPLEX, or Mosek. (documentation at http://javailp.sourceforge.net/)
HcryptoJ (Historical cryptology in Java) is a Java based programming library for implementing and analyzing historical ciphers. HcryptoJ is designed to support research and teaching in historical cryptography and computer science. Licensed under GPL.
CORPSE (CORPus SEarch) is a powerful search engine written in Java. The aim is to provide an efficient implementation of a word level inverted index search with various cool functions that can be used on very large corpora.
A cross-platform Java program to turn a simple Geiger counter into the equivalent of a state-of-the art digital model, plus some – using your laptop computer.