Search Results for "gnu/linux" - Page 51
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Showing 9759 open source projects for "gnu/linux"
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An alignment-free standalone tool with interactive graphical user interface for DNA sequence comparison and analysis
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PBTK Optimizer
Application for optimization of parameters in PBTK models
Physiologically based toxicokinetic (PBTK) modeling offers great promise in environmental risk assessment, potentially speeding up dose-response studies while minimizing animal testing. Some limitations exist in the PBTK field, such as difficulty of model development and a lack of application specific software tools to help modelers. Some parameters used in PBTK models, such as tissue weights, are easily measure. Other parameters can be determined through in-vitro experiments or through... -
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TauFactor
MatLab App for calculating the tortuosity factor of microstructure
Please contact the author at sjc08@ic.ac.uk for any questions or if you wish to cite this application in a academic study. Journal paper available here: http://www.sciencedirect.com/science/article/pii/S2352711016300280 TauFactor is a MatLab application for efficiently calculating the tortuosity factor, as well as volume fractions, surface areas and triple phase boundary densities, from image based microstructural data. The tortuosity factor quantifies the apparent decrease in... -
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"SmartSoft" provides a component based approach to develop robotics software (http://smart-robotics.sourceforge.net/). This project provides a Message based (build on ACE from Douglas C. Schmidt) implementation of the SmartSoft idea.
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MoPAC
The Modular Pipeline for the Analysis of CRISPR screens
To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page. -
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Ganja.js
Javascript Geometric Algebra Generator for Javascript, c++
Ganja.js is a Geometric Algebra code generator for javascript. It generates Clifford algebras and sub-algebras of any signature and implements operator overloading and algebraic constants. Mathematically, an algebra generated by ganja.js is a graded exterior (Grassmann) algebra (or one of its subalgebras) with a non-metric outer product, extended (Clifford) with geometric and contraction inner products, a Poincare duality operator and the main involutions and morphisms. Technically, ganja.js... -
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ModularBipolynom
Modular Polynom manipulation in Java
XY modular Polynom manipulation in Java for calculating elliptic curves point order -
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DACPEI
Conceptual design of Light Fixed Wing Aircraft
DACPEI is a WYSIWUG Software for Conceptual design of Light Fixed Wing aircraft. It is specifically designed to be intuitive and easy to use by engineering students (not necessary aerospace/aeronautics). DACPEI is divided in 9 modules, for analyzing mission profile, Aircraft performance, propulsion and layout design, as well as sketch component for developing aircraft drawings. DACPEI enable users to export their design to the FlightGear flight simulator software, enabling the designer to... -
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CASUP
Cellular Automata library for SUPercomputers (CASUP)
CASUP is a Cellular Automata (CA) library for HPC and supercomputers. It can be used in materials science (microstructure evolution, grain coarsening, fracture etc.), physics (Ising magnetisation) and for many other CA. If you use the library, please reference it as: A. Shterenlikht, L. Margetts, Three-dimensional cellular automata modelling of cleavage propagation across crystal boundaries in polycrystalline microstructures, Proc. Roy. Soc. A 471:20150039, DOI:... -
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Generic predictor that not depends data itself, this assumes original data is in L2(R) and there exists sampling theorem.
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ObjectVolume
Calculates Volume, Surface Area & Centroid of a Closed Triangular Mesh
The ObjectVolume program calculates the volume, surface area and centroid of a closed triangular mesh represented in an object file (.obj). The process goes through the list of triangles that make up the surface and, for each triangle, forms a tetrahedron with an external point. The program uses the origin (0,0,0). The volume of the tetrahedron is then calculated. Tetrahedrons with back facing triangles are added and those with forward facing triangles are subtracted yielding the object... -
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Another simpler implementation for float only uses integer types, we should use -msoft-float first or we get complex result, so we need this with huge or tiny exponents float.
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C++QED
A framework for simulating open quantum dynamics
C++QED is an application-programming framework for simulating open quantum dynamics in general. It has demonstrated the ability to simulate full Master equation of up to several thousand, and quantum trajectories of up to several hundred thousand dimensions. The basic idea is to allow users to build arbitrarily complex interacting quantum systems out of free subsystems and interactions (elements), and simulate their time evolution with a number of available time-evolution... -
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Puts
Make a TOC and links to original articles.
This program aims to make a TOC and links to original articles from middle sized text sets through small sized dictionaries. -
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The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
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SimpleLemmatizer
This program is for text lemmatization
It lemmatizes texts based on supplied model. The base model is for slovak texts and is created from Slovak National Corpus, copyright by Ľ. Štúr Institute of Linguistics, Slovak Academy of Sciences -
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Big Q Sort
An in-place external sort
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Open Drug Discovery Toolkit (ODDT)
Modular and comprehensive toolkit for use in cheminformatics
Open Drug Discovery Toolkit (ODDT) is modular and comprehensive toolkit for use in cheminformatics, molecular modeling etc. ODDT is written in Python, and makes extensive use of Numpy/Scipy. You can use any supported toolkit united under common API (for reference see Pybel or Cinfony). All methods and software based on Pybel/Cinfony should be drop-in compatible with ODDT toolkits. In contrast to its predecessors, which were aimed to have minimalistic API, ODDT introduces extended methods and... -
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iqr is a simulation software to graphically design and control large-scale neuronal models. Simulations in iqr can control real-world devices in real-time. iqr can be extended by new neuron, and synapse types, and custom interfaces to hardware.
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AdaAutoDiff
C++ Templates and Ada Package for Automatic Differentiation
Operators are overloaded so that a normal looking function definition provides access to not only evaluations of itself, but to evaluations of any of its analytic derivatives. Automatic differentiation means the user does not need to define the analytic expressions for all the various partial derivatives. It also means that those complex expressions are essentially calculated at compile time, and merely evaluated at runtime. First order derivatives only, forward... -
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EasyNetVars
Data Exchange between CoDeSys Devices and .NET via Network Variables
Library (.DLL) for Data Exchange between CoDeSys Devices and .NET and Step 7 via Network-Variables written in C# V1.0: Bugfixes New 02/2015: Read and Write Operations possible for more than 255 byte. - Read and Write Operations CoDeSys -> .NET - Method to create .GVL-File to import in CoDeSys Example in Step 7 (TIA-Portal) for Data-exchange between CoDeSys and Siemens S7 Devices CoDeSys -> Step7 (S7-1200): https://sourceforge.net/projects/easynetvars/files/NetVarsStep7/ See... -
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EPICS Version 4
MOVED project - go to: https://epics-controls.org
This project has been merged into EPICS Base. Visit https://epics-controls.org for further information. -
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rpackage conjurer
Synthetic data generation using R
Builds synthetic data applicable across multiple domains. This package also provides flexibility to control data distribution to make it relevant to many industry examples.
