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Biological Annotation Tool is a general-purpose high speed environment for manipulating biological sequence annotations in multiple input and output formats. A plugin-style API permits much extensibility.
prefix is a command line prefix calculator written in python. It supports basic math functions (add, subtract, multiply, divide) as well as some more advanced (exponents, logarithms, etc.)
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A package for preference handling and aggregation rules. A number of voting rules discussed in social choice literature have been implemented in order to study various properties of these rules in simulations with randomly generated preferences.
PyGiNaC is a Python interface to the C++ symbolic math library GiNaC (www.ginac.de). Its design attempts to be an easy to use and convenient alternative to cint or ginsh.
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Cellogica is a cellular logic analysis tool. It incorporates sequential logic and finite state machine to elucidate the relationship between transcription factors and corresponding gene expression.
This library allows you to control a PMS (Particle Measuring Systems) Lasair II air particles counter. You can either use a COM component from several programming languages (Visual Basic, ...) or directly use its underlying Python class.
The Campaign Simulator is an attempt to statistically model and predict the outcome of an American presidential election; several users assume the roles of competitive candidates and inflict the repercussions of certain decisions on a GSS based dataset.
pyDATR is an implementation of the DATR language written in Python and usable as Python library. It provides a means for persistence and some extensability with Python functions.
C++ and Python based open source graph visualization and analysis software, primarily intended for use in the analysis of social networks (other applications are also conceivable).
Graphical or terminal-based stopwatch with many user-named lap timers. Save / restore timing results via CSV file; timer "runs" even when application isn't running! Supports lap timer label templates. Hildonized (i.e., also runs on Maemo / Nokia 770).
GIRAFFE Base Line Data Reduction Software is a set of python scripts and modules
and a C library to reduce FITS images produced by the Very Large Telescope (VLT)
FLAMES instrument.
An object-oriented partial differential equation (PDE) solver, written in Python, based on a standard finite volume approach and includes interface tracking algorithms. *WARNING* The project is no longer using Sourceforge to maintain its repository.
BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.
We experiment with Evolution of Artifical Neural Networks, combining the two fields of Evolutionary Computation and ANNs. Our methods are applied to a variety of interesting problems. To learn more, click on "Home Page", "Mail", or "Files".
Cleaver is a program for comparing restriction endonuclease digests of orthologous DNA sequences from different taxa. It performs virtual restriction digests and searches for endonucleases that cleave DNA fragments from given taxa but not others.
Tk-based standalone graphing system and extensible graphing library with a huge range of 2d modes (maybe 3d soon?) written in Python (Python/Tk are 100% cross platform)