Search Results for "python programming language" - Page 5
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Showing 242 open source projects for "python programming language"
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PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. PRADA currently supports 7 modules to process and identify... -
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Aelius Brazilian Portuguese POS-Tagger
Python, NLTK-based package for shallow parsing of Brazilian Portuguese
Aelius is an ongoing open source project aiming at developing a suite of Python, NLTK-based modules and interfaces to external freely available tools for shallow parsing of Brazilian Portuguese. It also includes language resources such as language models, sample texts, and gold standards. Presently, Aelius already offers facilities for POS-tagging and chunking corpora and outputting annotations in different formats, such as in XML in the TEI P5 encoding scheme. -
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Larch: Data Analysis for X-ray Spectra
Data Processing and Analysis for X-ray Spectroscopy and More
...Larch is written in Python and relies heavily on the standard tools for scientific computing with Python (numpy, scipy, matplotlib, and h5py). -
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TeachingDemos
Bioinformatics related demos and tutorials using the R programming lan
Bioinformatics related demos and tutorials using the R programming language for large biological data. Licence: Creative Commons Attribution-NonCommercial 4.0 International License -
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Board Game Language (BGL, pronounced "bagel") is a natural language syntax programming language for first-time programmers. It uses board games as a metaphor for programming concepts, with the goal of teaching users the foundations of programming.
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Spatial Grammar Interpreter Applet: A 3D spatial grammar interpreter that provides for the interactive, visual development and application of three-dimensional parametric grammar rules.
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yorick
scientific programming language and graphics
Yorick is an interpreted programming language for scientific simulations or calculations, postprocessing or steering large simulation codes, interactive scientific graphics, and reading, writing, or translating large files of numbers. -
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WARNING: Project moved to http://github.com/scemama/irpf90 IRPF90 is a Fortran90 preprocessor written in Python for programming using the Implicit Reference to Parameters (IRP) method. It simplifies the development of large fortran codes in the field of scientific high performance computing.
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SeqSelector
Tools to select sequences for capture enrichment of next-gen libraries
The SeqSelector toolset is a suite of user-friendly, platform independent python scripts to facilitate selection of sequences for targeted enrichment of next-generation libraries through hybridization-based sequence capture. The scripts require no knowledge of programming, and can be applied to genome sequences of model or non-model species. We suggest a workflow in which genes of interest are first identified from previous studies and publicly available datasets of functional gene annotation. ... -
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To design a complete, wheeled robot, capable of accomplishing simple tasks, manipulate objects and have human interaction capabilities. Includes electronic board design, firmware and AI programming, computer-robot interaction software and mechanics.
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acp245
ACP245 Suite: Brazil Telematics protocol implementation
This "suite" includes a portable reference implementation and testing tools for ACP245, the automotive Telematics protocol defined by Brazil government. see: http://www.denatran.gov.br/simrav/simrav.asp -
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ExactCalc
Software for exact computing based on interval arithmetic.
...Instability is actually speed of accumulating the truncation error, but it can be decreased arbitrary by using more precise computation. Interval arithmetic provides us control of accumulating truncating error. To save Your time using CPU time this program provides interpreter of simple programming language based on interval algebra with arbitrary precision arithmetic. -
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Language Constructor
Complete tool for constructing/manipulating languages in digital form
With this tool you can easily design a new language, digitize an existing one or incrementally reconstruct an ancient language. It allows for free experimentation of all aspects of the language, so it does not have to be made consistent on paper first. You can edit script, syntax, grammar, morphology, lexicon and phonology, as well as write documents in the language, as it might be too complex to be handled by current font technology. The information is stored in xml format for easy... -
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binary Turing Machine
A Turing Machine Simulator
Free binary Turing Machine simulator with a graphical user interface and possibility to save your files. Language : French (no translation available) -
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LeapInto
Simplified interface to Leap Motion designed for art and music apps
...Multiple hand recognition is simplified to several stable categories and coordinates are normalised. The interface comes two flavours at present, an open broadcast system using the OSC protocol and a plugin for the Csound audio/music programming language. -
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Automatic Compound Processing (AuCoPro)
Automatic compound splitting and semantic analysis of compounds
The central problem to be addressed in this project concerns a multidisciplinary (linguistics and computational linguistics) investigation into sharing of knowledge and resources between closely-related languages, specifically relating to the automatic processing of compounds. Specifically, we will explore the possibility to create new knowledge about closely-related languages, and efficiently develop additional, more advanced resources for (a) compound segmentation; and (b) the semantic... -
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SphereSim
Physical simulation of particle movements
...By forces (such as gravity in a particular direction and between the particles, repulsion of the particles against each other and from the walls, Lennard-Jones-Potential between particles) different physical effects in particle groups are calculated and shown, such as the Brownian motion. The application uses the programming language C++ and the Qt, OpenGL and OpenMP libraries. -
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An application programming (API) and graphical user interface (GUI) to facilitate the use of PENELOPE's program PENEPMA.
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The Generic Graphics Toolkit is a library of generic programming primitives that allow applications to be written that adapt to whatever underlying graphics system the developer is using.
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I is a cross-platform programming language designed towards efficiency during development and at runtime.
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Myrtle
A simple programmable spreadsheet for learning statistics.
Myrtle is a simple programmable spreadsheet and statistical analysis software specifically designed for learning statistics. It provides the standard spreadsheet functionality one would expect like multiple tabbed sheets, relative and absolute row and column referencing in formulas, and a large catalog of built-in functions. Functions specific to logic and computer science, mathematics, probability, and statistics are available. Student's can easily create, customize, and update plots and... -
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Activity Prediction Software
To envision the radiation exposure in Neutron Activation Experiments
A software called Activity Predictor is developed using Java TM programming language. The Activity Predictor calculates activities, exposure rates and gamma spectra of activated samples for NAA experiments. The calculation procedure for predictions involve both analytical and Monte Carlo methods. The Activity Predictor software is validated by a series of activation experiments. It has been found that this software calculates the activities and exposure rates precisely. ... -
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ntccKMC
ntccKMC: A Kripke-structure-based model checker for ntcc
ntccKMC: A Kripke-structure-based linear-time-logic model checker for the Non-deterministic Timed Concurrent Constraint Programming (ntcc) calculus. Inspired by Jaime Arias' Python implementation and algorithms and Avispa's ntcc interpreter Developed by Mauricio Toro under Colciencia's React+ of the Avispa research group. -
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jHepWork
jHepWork was a name of the DataMelt program in 2005-20013
jHepWork (2005-2013) was an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with the Jython (Python) scripting language. Currently the project is known under the name DataMelt (https://datamelt.org) -
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pyisocalc
Isotopic pattern calculator in python 2.x
This is an isotopic pattern calculator written in python. It depends on re, sys, numpy, operator, itertools, and matplotlib.
