Showing 134 open source projects for "java projects big"

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  • 1
    Javamony

    Javamony

    A Student's Approach to the Phylogenetic Problem

    Based on the not-so-successful Pysimony (https://sourceforge.net/projects/pysimony/), the same determined student takes another go at the phylogenetic problem. Javamony is invoked as follows: java -jar Javamony.jar [input.fasta] [random / stepwise (starting tree)] [# of bootstraps] [outgroup taxon #1] [outgroup taxon #2] ... Not meant as a competitive phylogenetic inference program, Javamony is an opportunity for me to acquire the Java language while learning to address and solve fundamental problems in phylogenetics. ...
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  • 2
    JECL, pronounced "Jekyll", is an open-source Java library implementing a variety of evolutionary algorithms. The goal is to provide a uniform interface for describing problems, running evolutionary algorithms, and accumulating results. The Java Evolutionary Computation Library is no longer under active development. We suggest the MOEA Framework (http://www.moeaframework.org/), jMetal (http://jmetal.sourceforge.net/), ECJ (http://cs.gmu.edu/~eclab/projects/ecj/) or JGAP (http://jgap.sourceforge.net/) as alternatives.
    Downloads: 0 This Week
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  • 3
    Audivolv

    Audivolv

    Artificial intelligence evolves musical instruments played with mouse

    Artificial Intelligence (AI) evolves musical instruments you play with the mouse from small blocks of Java code that operate on numbers, each block designed to keep all numbers in range -1 to 1 if they started in that range, and combinations of these evolved codes running 44100 times per second for high quality 44.1 khz audio. You can also write the Java code into its window. Uses Javassist internal compiler on the new Java code assembled by renaming variables to overlap eachother and reordering, copying, and removing blocks of code. ...
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  • 4
    JFinisher

    JFinisher

    JFinisher is software for alignment, editing and manipulation DNA seqs

    JFinisher is software for alignment, editing and manipulation of biological sequences. It aims to assist in the finishing of genome assembly. Starting from a reference sequence, the program align contigs using Smith-Waterman local alignment algoritm with auxiliary methods, allowing management of the alignments generated. It has graphical interface for manipulation and visualization of the actions, uniting features that help in editing the sequences. It has internal projects manageable and...
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  • 5

    Quiver-A Decision Support System for SE

    Quiver is concieved -Decision Support System for Software Engineering

    Quiver is one step to decision support for software engineering. Started as the dissertation work done by Abhilash as part of Masters Software Systems at BITS Pilani http://sourceforge.net/projects/quiver-dss/files/AG-SemPresent1.0.pdf/download Stage 2 The project got a big review in the CONSEG 2011 conference organized by Computer Society of India (CSI). http://www.ebay.in/itm/Proceedings-International-Conference-Software-Engineering-CONSEG-2011-/270829182208 The requirements of Quiver 2 are discussed at: http://sourceforge.net/projects/quiver-dss/files/Requirements_Project002.pdf/download SEAMLESS SOFTWARE ENGINEERING– A STEP TOWARDS AUTOMATION OF SOFTWARE DEVELOPMENT LIFECYCLE Software engineering the entire of software development lifecycle, still requires human intervention in every step. . ...
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  • 6
    Apolda is a plugin for the Gate framework (see http://sourceforge.net/projects/gate/) that annotates texts with labels of concepts from an arbitrary OWL-ontology.
    Downloads: 0 This Week
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  • 7
    Interactive4J
    Project aim to provide simple easy APIs for Java developers to use interactive abilities in their Java Applications like speech recognition, handwriting recognition, use of web cam , sound record/play, decision trees , text to speech and many others.
    Downloads: 0 This Week
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  • 8
    Object oriented reusable software classes designed to be used to construct larger software projects developed in multiple software languages.
    Downloads: 1 This Week
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  • 9
    Daniel Farinha's personal open source repository. This is the place for Dan's sandbox, small utilities, libraries, and other personal projects at incubation stage.
    Downloads: 0 This Week
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  • 10
    Java JNI API for morphological analysis of Russian. Note: C++ JNI code and the core code is at the project http://sourceforge.net/projects/seman/ .
    Downloads: 0 This Week
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  • 11
    ST-Toolkit
    Spatio Temporal Toolkit is a pure Java "Conceptual" library released under LGPL License that is used to manipulate spatio temporal data-sets. This library is giving powerful boosts to data warehouse projects that envolves spatio-temporal data handling.
    Downloads: 0 This Week
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  • 12
    The collaborative framework Conzilla has primarily been developed to enhance the concept browser Conzilla (http://www.conzilla.org) with collaboration facilities. The Collaborilla framework is generic and can be used by other projects as well.
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  • 13
    Don't hard-code data-structures for Artificial Intelligence (AI). Evolve them (and control flow) as cycles of arrays in arrays with size constraints based on other array sizes (at specific index) in terms of range, multiply, exponent, or permutation. No working code yet. Whats there now is an extension of GigaLineCompile which would become part of Human AI Net, but there are other projects to finish before I can come back to this one.
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  • 14
    Decimal floating point library in Java. Provides decimal floating point math for Java via a clean, easy to understand implementation. Much easier to use than Big Decimal, nearly IEEE-854 compliant. Compatible with J2ME, so it can be used on PDAs/phon
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  • 15
    Elly is a reasoner for entailment and satisfiability checking of ELP knowledge-bases. It is written in java and relies on the IRIS Datalog reasoner (https://sourceforge.net/projects/iris-reasoner) for its implementation.
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  • 16
    Z-Machine Preservation Project
    An Interactive Fiction Player written for Java Virtual Machine. It implements the Z-machine and Glulx specifications and can be used either standalone or as an applet. The Z-Code/Glulx interpreter runs adventures made by Infocom and contemporary Inte
    Downloads: 1 This Week
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  • 17
    Biodiversity Information Group develops software tools and data standards that enable herbaria and museums to create dynamic distributed queries of their online databases. See http://bit.ly/bfirSh and http://bit.ly/bwpnSY for latest developments.
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  • 18
    CommonMap is an open source map project, forked from OpenStreetMap by a licence problem. CommonMap needs original softwares tuned for CommonMap. Most of software would be useful for any other open source map projects, too.
    Downloads: 0 This Week
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  • 19
    To help math students visualize the prufer code and/or discover anything new about the prufer code not already present. Examples and live applet on webiste.
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  • 20
    QSAR is a project that aims to build a GUI that enables people to build quantitative structure activity (or property) relationship models. It will use parts of CDK (cdk.sf.net), JOELib (joelib.sf.net), R (www.r-project.org) and other projects.
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  • 21
    Management and archiving of archaeological survey projects with some GIS-components.
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  • 22
    JAMBLAST: Java Application Manager for the ncbi BLAST results. It is a graphic application that allow the user to display, filter, sort, import/export, store/manage BLAST results produced with the NOBLAST (https://sourceforge.net/projects/noblast).
    Downloads: 0 This Week
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  • 23
    This Project moved to https://sourceforge.net/projects/synbiowave/ because the name GeneWave is a registered trademark... Please do not use this project anymore.
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  • 24
    Tool for retrieve, via Web, statistics from bug trackers in free/open source software projects. The aim of this software is to provide researchers with statistics about bug-fixing process in a project
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  • 25
    Calculating 2D-Gray-scale bitmaps Calculation of a 3D-rotation-body form a detected area by using different image processing algorithms. Developed for the German Aerospace Center (DLR). Used Projects: Substance (GUI)
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