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EMBOSS is a dynamic and comprehensive Open Source package for bioinformatics (DNA and protein sequence analysis, protein structure, phylogenetics, etc.). EMBOSS is written in C, also compatible with C++, and has a separate Java interface (Jemboss)
A language modeling tool kit written in Java for natural language processing applications. It can handle character-by-character modeling of unknown words, language model combination, comparison, and evaluation, as well as a number of smoothing techniques
A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.
GEZEL is a cycle-based hardware description language. The GEZEL tools offer stand-alone - and cosimulation, and code-generation into VHDL code. User-defined library-block extensions in C++ allow to add new cosimulation/cosynthesis interfaces.
FAUNUS is an object oriented class library for molecular simulation, written in C++. It contains routines and utility programs for, Metropolis Monte Carlo sampling (NVT, NPT, NmuT ensembles), Macromolecules, Proton Titration, Widom Analysis etc.
JDice rolls dice. A simple yet rich language allows to express several kinds of roll schemes, including any dice type, rerolling, selecting highest/lowest, counting, etc.
Genie is a highly sophisticated cognitive child-machine. Genie at its core is an artificial intelligence project, focusing on creating a new form of life.
MATLAB Audio Database Toolbox enables easy access and filtering of audio databases such as TIMIT and YOHO by their metadata. The database toolbox comes to replace the manual filtering and custom coding usually required for accessing such databases.
With the "xix" library, GATE functionality is available in XQuery (via an MXQuery extension). OpenCalais invocation is supported, too. -- Source code at http://sgv-jenkins-01.ethz.ch/job/xixlib/ws/-- "Show project details" for instruction
PerlMol is a collection of Perl modules for chemoinformatics and computational chemistry with the philosophy that "simple things should be simple". It should be possible to write one-liners that use this toolkit to do meaningful "molecular munging".
The openLBMflow is an fast fluid flow solver based on Lattice Boltzmann Method. Main future are 2D and 3D code, single and multiphase models, Output data in VTK format can be directly open in Paraview. Download Windows or Linux binary version now.
Multi-functional batch sequence aligner incorporating Needleman-Wunsch, Smith-Waterman and Oommen-Kashyap algorithms along with compound alignment of secondary sequences.
Scripts for parsing and general use in Computer Forensics - Octane Lab
O projeto Byte Investigator do Octane Labs nasceu com a finalidade de se ter um kit de ferramentas (scripts perl) de parsing de varias estruturas do ambiente Windows (arquivos e estruturas dos file systems). Estas ferramentas poderão ser utilizadas no cotidiano dos profissionais e pesquisadores de segurança nas tratativas de resposta a incidentes de Segurança de Informação e Computação Forense. A técnica de parser ou parsing consiste em usar um programa que detalhe as informações contidas em...
CodeIgor makes copies of given files, substituting user-defined patterns for given values. Every copy is related to a scpecific 'solution', so that you may define different versions of the same file, having the same patterns but different values.
h2:www is an easily extendable online interface for bioinformatical command-line tools, providing convenient project-oriented working facilities for multiple users.
The Scheme Natural Language Toolkit (S-NLTK) is a Scheme R6RS library for language and text processing, and various tasks related to symbolic and statistical analysis of language data.
D.U.C.K (Determine segmentation of Unknown words by using Context Knowledge)is an NLP tool, which aims to find the correct segmentation for unknown words in written Hebrew. Statistics from different scopes will be used to determine the segmentation.
VgaSim simulates a VGA screen connected to your VHDL and VeriLog design. Simulated signals from your desing will handle the virtual VGA screen such as it were real.
VgaSim works with VHDL and VeriLog simulators such as ModelSim and GHDL.
The SPASE Toolkit contains a set of command-line applications which can be used to generate, validate, referentially check, use and organize resource descriptions written in SPASE XML.