Search Results for "cynetsvm-java" - Page 28
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Showing 3761 open source projects for "cynetsvm-java"
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VarScan
Variant detection in next-generation sequencing data
Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes. THE LATEST VERSION IS AVAILABLE ON GITHUB -
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S2O
Converting IBM SPSS files to CDISC ODM
... - Pre- / Pilot-Studies based on spreadsheets should now be enhanced towards multi-site/multi-user data collection. Conversion of SPSS variable structure as well as entered values. To use: - Move s2o.jar into SPSS installation folder (where spss.exe is located) - Call via "java -jar s2o.jar" -
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jAgg
jAgg - Java Aggregation Operations
jAgg is a Java 5.0 API that supports “group by” operations on Lists of Java objects: aggregate operations such as count, sum, max, min, avg, and many more. It supports Super Aggregation: Rollups, Cube, and Grouping Sets. It supports analytic operations such as lag/lead and row number and more. It also allows custom aggregate and analytic operations. -
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This is a parser in Java for Lisp S-expressions. An S-expression or sexp (for symbolic expression) is a convention for representing data using parentheses.
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Cut Data Warehouse Costs by 54%BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
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Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.
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The bflow* Toolbox is an open source tool kit for business process management. The objective of bflow* is to explore new ways and scenarios for the development and use of modelling tools.
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MattsMathTools
MathTools is an aid in preparing printed math tests.
Matt's MathTools is a Java application designed as an aid in preparing printed math tests. It is easily embedded in other Java applications or it can be used alone as a single-user desktop app. It includes a scripting environment, numerous demonstration classes and several general utilities. A scripting tutorial is also available. -
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TOVAL: Toms Java Library
Library with classes for common programming issues.
TOVAL comprises a set of java classes for common programming issues. It includes utils for arrays, lists, sets and collections for convenient handling and modification, but also support for mathematic definitions concerning logic (clauses + resolution) together with some algorithms for permutations, powersets and resolution. Additionally it contains a number of types for multisets, matrices with object keys and much more. -
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mathCollection is a java package representing a consistent and efficient extension to the Java Collection Framework of JDK 1.4. It offers different kinds of sets with mathematical, non-destructive functions.
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The Protein Similarity Network
Human protein similarity network used to predict drug safety.
This is the protein similarity network - PSIN. Here, the nodes are human proteins and they are linked only if they share considerable sequence similarity. We found that this network is particularly useful to distinguish approved from problematic drug-targets. Here you also find the complete set of programs and datasets we used for this purpose. Free to help further test and develop this project. Your help and expertise are much appreciated ! If you have any questions, please do... -
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EXMARaLDA stands for "Extensible Markup Language for Discourse Annotation". It's a system of concepts, data formats and tools for the computer assisted transcription and annotation of spoken language, and the analysis of spoken language corpora. This project's source code has moved to https://github.com/Exmaralda-Org/exmaralda
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...The user builds his system model by selecting predefined blocks from a block library and simply wiring the blocks together. Each block of the diagram performs a function. Users can also create custom blocks in Java and add them to the JMCAD block library. JMCAD is a block diagram language for creating complex nonlinear dynamic systems.
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PLEASE NOTE: THIS PROJECT PAGE WILL NO LONGER BE UPDATED - PLEASE USE THE GITHUB PAGE (https://github.com/gantzgraf/MutationMapper) TO FIND THE LATEST RELEASE (https://github.com/gantzgraf/MutationMapper/releases/latest). Predict functional consequences of mutations identified from sanger sequencing.
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Java ray tracing library. Intended for optic system design, not intended for rendering. Handles generic surfaces (cone, sphere, cylinder, user-defined) including Fresnel or micro-structured material; handles reflection and refraction.
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safecap
Safecap Platform for improving railway capacity via formal modelling
The overall aim of the SafeCap project is to develop modelling techniques and tools for improving railway capacity while ensuring that safety standards are maintained. Useful links: Project homepage: http://http://safecap.co.uk/ -
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Implementation of an OGC Web Map Service, primarily for serving images dynamically generated from NetCDF data files (although other file formats can also be handled). Also an AJAX web mapping interface based on OpenLayers.
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JAGAL: Java Graph Library
Java graph library
JAGAL provides implementations for directed graphs (weighted and unweighted) and varoius types of transition systems as well as utils for graph traversal and modification. JAGAL builds upon the Java library TOVAL (located at http://sourceforge.net/p/toval). To use JAGAL, make sure the TOVAL library is on the build path. This library uses and encloses jGraphX (https://github.com/jgraph/jgraphx). A documentation for JAGAL can be found under http://doku.telematik.uni-freiburg.de/jagal. -
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Gravity Simulator
Multithreaded N-Point Gravity Simulation for PC and Android
Create a sun, spin some asteroids around it, and watch them collide and form planets. An N-Point Gravity Simulator is a realistic simulation in which all points attract each other: even the smallest asteroid has its own gravitational field that can affect even a large sun far away from it. Can be reused as a library for making games. If used as library, license is GNU LGPLv3, otherwise it's GNU GPLv3. -
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BANNER is a named entity recognition system intended primarily for biomedical text. It uses conditional random fields as the primary recognition engine and includes a wide survey of the best techniques described in recent literature.
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Qfsm
A graphical Finite State Machine (FSM) designer.
A graphical tool for designing finite state machines and exporting them to Hardware Description Languages, such as VHDL, AHDL, Verilog, or Ragel/SMC files for C, C++, Objective-C, Java, Python, PHP, Perl, Lua code generation. -
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VSOL
Aplicativo para simulação e solução de vigas
Este aplicativo foi desenvolvido através de um trabalho de conclusão do curso de Engenharia Civil da Universidade do Extremo Sul Catarinense. Seu uso está restrito para fins educacionais e não deve ser reproduzido comercialmente. O usuário é responsável pelas conclusões dos resultados obtidos pelo aplicativo. O autor, orientador e instituição de ensino envolvidos no desenvolvimento desse aplicativo, não têm nenhum dever legal ou responsabilidade por danos causados de forma direta ou indireta... -
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eNTranslator
To aid translation of satsangs of Paramhamsa Nithyananda
To aid translation of satsangs of Paramhamsa Nithyananda. Can be used for general purpose by others as well. This translator desktop app uses google translator to translate English text. The auto generated translations are then enriched with human alternation using an easy graphical user interface. Time stamp information may be synched and a subtitle file or a simple textual output may be generated. Additionally it is planned to use google voice tools to also add voice over from these... -
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An API for manipulating EDIF netlists in Java. We use this API to analyze netlists as a part of our FPGA reliability project. We intend to keep the API as general as possible to support other netlist analysis and manipulation activities. This material is based upon work supported by the National Science Foundation under Grant No. 0801876. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
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MOEA Framework
A Free and Open Source Java Framework for Multiobjective Optimization
The MOEA Framework is a free and open source Java library for developing and experimenting with multiobjective evolutionary algorithms (MOEAs) and other general-purpose multiobjective optimization algorithms. The MOEA Framework supports genetic algorithms, differential evolution, particle swarm optimization, genetic programming, grammatical evolution, and more. A number of algorithms are provided out-of-the-box, including NSGA-II, NSGA-III, ε-MOEA, GDE3 and MOEA/D.
