Showing 1375 open source projects for "linux command"

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  • 1
    EMC: Enhanced Monte Carlo; A multi-purpose modular and easy extendable solution to molecular and mesoscale simulations
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    Downloads: 77 This Week
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  • 2
    Elk
    An all-electron full-potential linearised augmented-planewave (FP-LAPW) code. Designed to be as developer friendly as possible so that new developments in the field of density functional theory (DFT) can be added quickly and reliably.
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    Downloads: 163 This Week
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  • 3
    Biosignal Tools
    BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.
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    Downloads: 176 This Week
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  • 4
    Octave Forge

    Octave Forge

    A collection of packages providing extra functionality for GNU Octave

    Octave Forge is a central location for collaborative development of packages for GNU Octave. The Octave Forge packages expand Octave's core functionality by providing field specific features via Octave's package system. See https://octave.sourceforge.io/packages.php for a list of all available packages. GNU Octave is a high-level interpreted language, primarily intended for numerical computations. It provides capabilities for the numerical solution of linear and nonlinear problems, and...
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    Downloads: 1,473 This Week
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    XMedCon

    XMedCon

    medical image conversion utility

    a medical image conversion utility & library; hereby hoping to lower at least one barrier in medical research projects.
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    Downloads: 86 This Week
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  • 6
    Hydrogen Bond Analysis Tool (HBAT)

    Hydrogen Bond Analysis Tool (HBAT)

    HBAT 2 is migrated from PERL to Python.

    HBAT(Hydrogen Bond Analysis Tool) is a tool to automate the analysis of hydrogen bonds present in a PDB Structure file. HBAT 2 is migrated from PERL to Python. Latest Documentation: https://hbat.abhishek-tiwari.com/ Web Server Version: http://hbat-web.abhishek-tiwari.com Latest Github Release: http://github.com/abhishektiwari/hbat Citation: Tiwari, A., & Panigrahi, S. K. (2007). HBAT: A Complete Package for Analysing Strong and Weak Hydrogen Bonds in Macromolecular Crystal...
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    Downloads: 65 This Week
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  • 7
    Wordom is a (simple) command line utility conceived to spare the user some time in manipulating, converting and analyzing molecular structure and molecular simulations files. Due to its simplicity, it is easy to add your own analysis module.
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    Downloads: 9 This Week
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  • 8
    Wcalc

    Wcalc

    A powerful arbitrary-precision calculator.

    Wcalc is a powerful arbitrary-precision calculator. It has standard functions (sin, asinh, logtwo, floor, etc), many pre-defined constants (pi, e, c, etc.), variables, "active" variables, command history, and hex/octal/binary i/o, conversions, and more
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    Downloads: 20 This Week
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  • 9
    OSRA is a utility designed to convert graphical representations of chemical structures and reactions, as they appear in journal articles, patent documents, textbooks, trade magazines etc., into SMILES or SD file format- a computer recognizable molecular structure You can find links to the binary executables here: https://sourceforge.net/p/osra/wiki/Download/
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    Downloads: 48 This Week
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  • 10
    OpenPFGW is software that is designed to perform PRP and primality tests on numbers of specific forms. This software currently run on any x86 hardware with the support of George Woltman's gwnum library, the same library behind GIMPS and Prime95.
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    Downloads: 16 This Week
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  • 11
    SWAN
    SWAN is a third-generation wave model, developed at Delft University of Technology, that computes random, short-crested wind-generated waves in coastal regions and inland waters.
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    Downloads: 82 This Week
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  • 12
    GCBASIC
    GCBASIC is an open-source BASIC compiler for 8 bit Microchip PIC, Atmel AVR legacy, AVRDx and LGT microcontrollers. See https://ko-fi.com/post/The-Story-of-GCBASIC-Making-Microcontroller-Progr-D1D319SJ72 for story of GCBASIC. This is a continuous release project. The latest release is always available. This will give you the most complete development toolchain to create and program 8-bit PIC, AVR and LGT microcontrollers. We have added new capabilities that make GCBASIC the...
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    Downloads: 204 This Week
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  • 13
    RPNCalc

    RPNCalc

    RPNCalc - The command line Reverse Polish Notation (RPN) Calculator

    RPNCalc is the command-line based Reverse Polish Notation (RPN) calculator. RPN calculators make it very simple to do complex calculations, especially if there are parentheses involved. I've created a User Guide (https://frossm.github.io/RPNCalc-UserGuide) to do a better job of explaining how to use RPNCalc than the old readme.md file, which was getting really long. If you have questions, issues, feedback, or ideas, please let me know. You can contact me via the links in the...
    Downloads: 7 This Week
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  • 14

    calc: C-style arbitrary precision system

    Calc: arbitrary precision C-like arithmetic & calculator

    Calc is arbitrary precision C-like arithmetic system that is a calculator, an algorithm prototyper and mathematical research tool. Calc comes with a rich set of builtin mathematical and programmatic functions.
    Downloads: 22 This Week
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  • 15

    MatCont

    Numerical Bifurcation Analysis Toolbox in Matlab

    MatCont is a Matlab software project for the numerical continuation and bifurcation study of continuous and discrete parameterized dynamical systems. Leaders of the project are Willy Govaerts (Gent,B) and Yuri A. Kuznetsov (Utrecht,NL) and Hil G.E. Meijer (UT, Enschede, NL). Matcont for ODEs and MatcontM for Maps Publishing a paper using our software? That's great. Please do us a favour and cite: New features of the software MatCont for bifurcation analysis of dynamical systems. A....
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    Downloads: 313 This Week
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  • 16
    SMILI

    SMILI

    Scientific Visualisation Made Easy

    The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with...
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    Downloads: 72 This Week
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  • 17
    PYroMat

    PYroMat

    Thermodynamic properties in python

    PYroMat brings the thermodynamic properties of nearly 1,000 species to Python users with only a few keystrokes. Entropy, enthalpy, specific heats, inverse functions, and more are available from ideal gases, their mixtures, and multi-phase steam. Accurate, fast, and tested; PYroMat is the open-source solution for students, researchers, design engineers, and tinkerers everywhere who need thermodynamic properties.
    Downloads: 29 This Week
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  • 18
    CRC RevEng

    CRC RevEng

    Arbitrary-precision CRC calculator and algorithm finder

    CRC RevEng is a portable, arbitrary-precision CRC calculator and algorithm finder. It calculates CRCs using any of the 113 preset algorithms, or a user-specified algorithm to any width. It calculates reversed CRCs to give the bit pattern that produces a desired forward CRC. CRC RevEng also reverse-engineers any CRC algorithm from sufficient correctly formatted message-CRC pairs and optional known parameters. It comprises powerful input interpretation options. Compliant with Ross Williams'...
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    Downloads: 93 This Week
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  • 19

    Java-Enigma

    Enigma Encryption Simulator in Java

    This program is an offline and stand-alone Java application which simulates the Enigma encryption machine that was used during World War II.
    Downloads: 4 This Week
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  • 20
    BRL-CAD

    BRL-CAD

    Open Source Solid Modeling CAD

    BRL-CAD is a powerful cross-platform constructive solid geometry solid modeling system that includes an interactive geometry editor, ray-tracing for rendering & geometric analyses, network distributed framebuffer support, image & signal-processing tools.
    Downloads: 88 This Week
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  • 21
    libTheSky

    libTheSky

    Fortran library to compute positions of celestial bodies

    libTheSky is a Fortran library to compute positions of celestial bodies (Moon, planets, stars) and events (conjunctions, eclipses). It forms the core of the software that produces the Dutch popular-astronomy website http://hemel.waarnemen.com
    Downloads: 12 This Week
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  • 22
    Grassroots DICOM

    Grassroots DICOM

    Cross-platform DICOM implementation

    Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets.
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    Downloads: 100 This Week
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  • 23
    MESMER is designed to analyze and simulate reactions in the gas phase that take place on a potential energy surface that is characterized by having one or more potential wells, and which are typically described by rate coefficients that depend on pressure (or concentration) as well as temperature. MESMER allows you to simulate systems over a wide range of pressures and temperatures, extract rate coefficients, analyze experimental data, fit model parameters and represent rate coefficients in...
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    Downloads: 15 This Week
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  • 24
    A Matlab toolkit for all aspects of EEG/ERP analysis, especially PCA. If you run into a problem, please send me a note and I'll fix it. The tutorial pdf is in the documentation folder and the tutorial data can be downloaded from a link provided by the pdf. The tutorial file has full install instructions. For all platforms supported by Matlab.
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    Downloads: 6 This Week
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  • 25

    Disposition

    Program to generate permutations and combinations

    C Library designed to generate in sequence permutations or combinations (possible orderings or subsets) of objects, with or without repetition. To demonstrate the use of the library, a command-line program (disp) and a GTK graphical version (GDisp) are provided too, useful to teach combinatorics.
    Downloads: 2 This Week
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