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ATOM is an OMERO client which allows automated import of image data into OMERO. ATOM is provided as is without any guarantees or warranty. The author is not responsible for any damage or losses of any kind caused by the use or misuse of the programs.
Screensaver is a Lab Information Management System (LIMS) for high-throughput screening of small molecule and RNAi biological assays. It is a Java/JSF/Hibernate/Spring web application that is actively being developed and used at Harvard Medical School.
Note: The Screensaver project has moved to GitHub at https://github.com/hmsiccbl/screensaver.
The Chemical Manager application can be of great help to Organic Chemistry Departments. University research groups will benefit from using this application, since it was optimized for their needs. Currently, Technion Chemistry department is benefiting from it.
OrthoInspector is a new software system for orthology/paralogy analysis. Its purpose is to facilitate the installation and the maintenance of a database describing orthology/inparalogy relations and to provide tools to exploit these data.
BioX (pronounce as bio cross) is a system for the management of local and remote (currently supporting RMI, CORBA and SOAP Web Services) components such as files and services (e.g. BLAST). Additionally, the components can be composed to workflows.
SGI allows to define and interpret most of undeterministic 2D shape grammars. It supports real-time subshape detection and labeled rules. GUI is designed for easy manipulation with shape grammars: creation of shapes, rules and generation of designs.
Coupling the notion that during the search for the minimum of a function we must pass through its solution with a PSO solution generator engine, is the approach for solving, in time domain, a non-linear algebric-differential system of equations.
Localization system for ZigBee networks. Based on the analysis of RSSI, estimates the positions of the mobile nodes. Firmware in C for the ZigBee modules. Java service produces results in a accessible webservlet, the user can manage the WSN network.
On The Mark is a video and image scoring system that allows one to mark any number of events and durations through a simple, easy-to-use graphical interface.
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WSNWARE is an open source Java/OSGi middleware, designed for monitoring, controlling and standardizing Wireless Sensor Network. WSNWARE is a normalized message oriented middleware running on (and developed for) any OSGi containers.
OpenEphyra is an open framework for question answering (QA). It retrieves answers to natural language questions from the Web and other sources. Visit http://www.ephyra.info/ for more details and information on joining this open research initiative.
An elevator (lift) system analysis and design tool. The main goal of the project is to produce the ultimate platform for comparing elevator control algorithms (call scheduling systems).
Jep is a Java package for parsing and evaluating mathematical expressions. It currently supports user defined variables, constants, and functions. The open-source Jep project was halted in favor of commercial development of version 3.0 upwards.
JEuclid is a complete MathML rendering solution, consisting of: a MathViewer application, command line converters from MathML to other formats, an ant task for autmated conversion, display components for AWT and Swing and a component for Apache Cocoon
A plugin for the VANTED system, called Glyph-based Link Exploration of Pathways (GLIEP). It helps to guide the navigation and exploration process of interconnected pathway visualization as well as insight into the overall interconnectivity.
A system to perform analysis of large documents for the purpose of cataloging similar documents. Similarity is based upon contextual analysis of these documents done by identifying common words and proper nouns.
PerMoTo is a Performance Modelling Tool suite for decision support in the capacity and performance management of distributed transaction processing systems based on Queueing Theory and Discrete Event Simulation.
XDAQ is a software platform designed specifically for the development of distributed data acquisition systems. The development is carried out at CERN, the European Organization for Nuclear Research. Please visit http://xdaq.web.cern.ch
DASM is a new simple platform which helps programmer to implement and evaluate any distributed algorithm. Programmer can implement his/her distributed algorithm using DASM primitives and monitors the results in diagrams during execution.
Healthcare Information System (EHR EMR PMS) for small hospitals and clinics. Scheduling, Orders, Meds, Pharmacy, Clinical Doc, HL7, Billing & more. Broad commercial support. Distributed clinical system written in pure Java with toolset to customize.
jLlama is a desktop application to monitor servers over SSH. Any figure retrieved from the command line can be polled and graphed in real time. Out of the box, jLlama can graph CPU and Memory usage for Linux and Solaris servers.
GUI to configurate and start XPlanet easily. Adds a downloader to XPlanet to load clouds, images and marker files from the internet. Generates cmd (windows) and configuration files for XPlanet and the downloader. Hides in the System Tray.
Project aim to provide simple easy APIs for Java developers to use interactive abilities in their Java Applications like speech recognition, handwriting recognition, use of web cam , sound record/play, decision trees , text to speech and many others.