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Showing 5 open source projects for "tigr"

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  • 1
    Automatically produce functional annotations for prokaryotic genomes, consisting of protein name, EC number, GO terms, & TIGR role. Initial version developed by JCVI; uses BLAST hits from Panda sequence database, and HMM hits from TIGRFAMs and Pfams.
    Downloads: 1 This Week
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  • 2
    LIGR Assembler is a sequence assembly program. It was derived from TIGR Assembler and addresses some of TIGR Assembler's shortcomings. See the CHANGES file for details.
    Downloads: 1 This Week
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  • 3
    Spotfinder is an image processing software tool for microarray image analisys. It is written on C++ with QT GUI toolkit and runs on Windows, X11, and Mac OSX.
    Downloads: 0 This Week
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  • 4
    This software collection is for a DNA sequencing laboratory. It is used to design closure/finishing reactions following a shotgun sequencing experiment. It requires a draft assembly composed of contigs and scaffolds.
    Downloads: 3 This Week
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  • 5
    PANDA (Protein And Nucleotide Data Archive) unifies the archival of the sequences from Taxonomy,GenBank,RefSeq,UniProt,PDB,and PRF on a regular interval to build and maintain a Protein and Nucleotide data archive. This project is part of BRC project fund
    Downloads: 0 This Week
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