Search Results for "pure data"
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Showing 32 open source projects for "pure data"
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The Pure Data (short Pd) project on SourceForge unifies the extensions (or externals) written for the Pure Data Graphical Computer Music System written by Miller Puckette with contributions from many others.
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ta4j
A Java library for technical analysis
Ta4j is an open-source Java library for technical analysis. It provides the basic components for the creation, evaluation, and execution of trading strategies. Ta4j is available on Maven Central. You can also download example code from the maven central repository. The wiki is the best place to start learning about ta4j. For more detailed questions, please use the issues tracker. We can calculate indicators over this bar series, in order to forecast the direction of prices through the study... -
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...It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. The nmrshiftdb2 software is open source, the data is published under an open content license. The core of nmrshitdb2 are fully assigned spectra with raw data and peak lists (we have pure peak lists as well). Those datasets are peer reviewed by a board of reviewers. The project is supported by a scientific advisory board. nmrshiftdb2 is part of the NFDI4Chem initiative (https://nfdi4chem.de/) and will provide a component for a curated repository there. ...
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Quite Universal Circuit Simulator
A circuit simulator with graphical user interface (GUI)
Qucs is a circuit simulator with graphical user interface. The software aims to support all kinds of circuit simulation types, e.g. DC, AC, S-parameter, Transient, Noise and Harmonic Balance analysis. Pure digital simulations are also supported. -
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GNNPCSAFT
Smart Thermodynamic Modeling with Graph Neural Networks
The GNNPCSAFT app is an implementation of our project that focuses on using Graph Neural Networks (GNN) to estimate the pure-component parameters of the Equation of State PC-SAFT. We developed this app so the scientific community can access the model's results easily. In this app, the estimated pure-component parameters can be used to calculate thermodynamic properties and compare them with experimental data from the ThermoML Archive. To install the GNNPCSAFT app, download the appropriate latest release from the Files, unzip the file, and run the executable for your operating system (Linux or Windows). ... -
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GNNPCSAFT Web App
Smart Thermodynamic Modeling with Graph Neural Networks
The GNNPCSAFT Web App is an implementation of our project that focuses on using Graph Neural Networks (GNN) to estimate the pure-component parameters of the Equation of State PC-SAFT. We developed this app so the scientific community can access the model's results easily. In this app, the estimated pure-component parameters can be used to calculate thermodynamic properties and compare them with experimental data from the ThermoML Archive. More info on github repository. -
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Jmol
An interactive viewer for three-dimensional chemical structures.
Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other... -
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MicroRNAs (miRNAs) are of significance in tuning and buffering gene expression. Despite abundant analysis tools have been developed in the last two decades, plant miRNA identification from next-generation sequencing (NGS) data remains challenging. Here present a user-friendly pure Java-based software package, SRICATs, which enable researchers to perform all steps of plant miRNA analysis based on convolutional neural network methods. SRICATs outperforms currently popular software tools on the test data from five plant species: Oryza sativa, Arabidopsis thaliana, Sorghum bicolor, Chlamydomonas reinhardtii and Physcomitrella patens.
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libpostal
A C library for parsing/normalizing street addresses around the world
A C library for parsing/normalizing street addresses around the world. Powered by statistical NLP and open geo data. libpostal is a C library for parsing/normalizing street addresses around the world using statistical NLP and open data. The goal of this project is to understand location-based strings in every language, everywhere. Addresses and the locations they represent are essential for any application dealing with maps (place search, transportation, on-demand/delivery services,... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Arduino HomeKit ESP8266
Native Apple HomeKit accessory implementation for the ESP8266 Arduino
This Arduino library is a native Apple HomeKit accessory implementation for the ESP8266 Arduino core and works without any additional bridges. This project is mainly based on an esp-home kit for ESP-OPEN-RTOS. I ported the RTOS-based implementation of the esp-home kit to the pure Arduino environment, aimed at easy and fast building projects using Arduino IDE (or Eclipse with sloeber, PlatformIO). Enjoy the "one-key" build, "one-key" upload, and work to link various other Arduino libraries... -
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VIKAMINE is a flexible environment for visual analytics, data mining and business intelligence - implemented in pure Java. It features several powerful visualization and mining methods, and can utilize background knowledge.
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WebVisu
Pure Browser based Visualisation for PLCs
Framework to enable PLC Visualisations (like Wago 750-841, Beck IPC, CoDeSys 2.3) displayed in a standalone Browser without Java applets. Including Browsers of iPad, iPhone, iPod, Android aso.. Based on HTML5 canvas and Javascript. -
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MarDRe
MapReduce-based tool to remove duplicate DNA reads
MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing. -
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nccmp
Compare two NetCDF files in-place.
We've moved to Gitlab! (gitlab.com/remikz/nccmp) Compares two NetCDF files in-place to find specific variables, dimensions and/or attributes that differ. Highly recommended for any test-driven environment and regression testing large datasets. -
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Witchcraft
Monads and other dark magic for Elixir
Witchcraft brings algebraic and category-theoretic abstractions—like semigroups, monoids, functors, applicatives, and monads—to Elixir in a pragmatic, protocol-driven way. It introduces a set of typeclass-style protocols and laws so data types can declare the operations they support and have those behaviors verified. The library encourages composability and pure transformations, letting you build pipelines where effects are modeled explicitly rather than hidden in ad-hoc helpers. Because the implementation leans on Elixir protocols, you can extend Witchcraft’s abstractions to your own structs without invasive inheritance hierarchies. ... -
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LibOpenCIF
A library to load CIF (Caltech Intermediate Form) files.
LibOpenCIF is an open source library for GNU/Linux that bring to the user basic loading of CIF (Caltech Intermediate Form) files. The library is writed and intented to be used in C++. -
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gametes
Generate complex SNP models and heterogeneous datasets
...Version 2.0, adds the ability to generate heterogeneous datasets by applying multiple independent models to different subsets of the simulated data. Additionally we have added a custom model generation feature, so that users may directly specify and examine the properties of any 2 or 3 locus SNP model. Simple Mendelian models may also be generated with this feature. -
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adLIMS
adLIMS: a Laboratory Information Management System with ADempiere
...We process around 1500 samples/year resulting in hundreds of millions of sequencing reads, requiring automation and posing new challenges in data storage, monitoring of sample process and computational tools for analyses. Thus we need to standardize data management and tracking systems, built on a scalable, flexible structure with an easily accessible and web based interface, what is usually called Laboratory Information Management System (LIMS). -
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quichem
Utilities for fast input of chemical formulae and equations.
*** New releases of quichem will only be available on GitHub. *** quichem is a utility written in pure Python allowing for fast input and parsing of chemical formulae and equations. Entering data does not require any modifier keys or keystrokes to be pressed. This SourceForge page provided pre-built Windows binaries of quichem-pyside. **To run quichem on Mac OS X or Linux**, or with the wxPython front-end, please download the source from quichem's GitHub page at: github.com/spamalot/quichem. -
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Java Dynamic Component Framework
This is a lightweight java dynamic component framework
...The components are pure Java classes file using a pure Java middleware. Each component may be packaged in a jar or several related components may be packaged together. Component migration over the network is planned. Go to the Wiki to have an overview. -
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GUI utility in pure Java for viewing and editing XML content; example of application built with Superficial http://superficial.sourceforge.net
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Geom4J is a computational geometry library for Java. It contains implementation of the most important computational geometry data structures and algorithms coded in pure Java, designed for ease of use and optimized for performance.
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Spatio Temporal Toolkit is a pure Java "Conceptual" library released under LGPL License that is used to manipulate spatio temporal data-sets. This library is giving powerful boosts to data warehouse projects that envolves spatio-temporal data handling.
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JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
