Search Results for "neuron"
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Showing 16 open source projects for "neuron"
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DDE-BIFTOOL
Bifurcation analysis for delay-differential equations
DDE-BIFTOOL is a set of routines for performing numerical bifurcation analysis of delay-differential equations, running in Matlab or Octave[2]. It was originally created by Koen Engelborghs at KU Leuven (Belgium). [1] Tutorial demo <http://ddebiftool.sourceforge.net/demos/neuron/html/demo1_simple.html> shows the output of an illustrative demo. <http://ddebiftool.sourceforge.net> links to documentation, a list of contributors and current maintainers. The original DDE-BIFTOOL webpage at KU Leuven [1] stores versions up to 3.0 and their documentation. [1] <http://twr.cs.kuleuven.be/research/software/delay/ddebiftool.shtml> [2] <https://www.gnu.org/software/octave> Further tutorials (by M Bosschaert) at <https://sites.google.com/a/uhasselt.be/maikel-bosschaert/home> (pdf files). -
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iqr is a simulation software to graphically design and control large-scale neuronal models. Simulations in iqr can control real-world devices in real-time. iqr can be extended by new neuron, and synapse types, and custom interfaces to hardware.
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NeuralSyns
NeuralSyns is a neural simulator for large spiking networks.
NeuralSyns is a neural simulator for large spiking networks. New neuron and synapse dynamics can be added, and complex network models can be easily built using the included tool NetBuilder. OpenGL is used to show the network's architecture and activity. -
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A neuronal network simulator using NeuroML (as generated by neuroConstruct) for network description. Conductance- and rate-based Hodgkin-Huxley neuron models, and a number of other neurons & synapses. A 5-6-order RK method is used for integration.
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Lerning Process Hypercube Neuron
Visualization of lerning process of hypercube neuron with two inputs.
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XNBC: neurobiology simulation tool
XNBC is a graphic application to simulate biologic neural networks.
XNBC is a full featured application for computer naive neuroscientists. It simulates biological neural networks using graphic tools to edit neurons and networks, to run the simulation and to analyze results. Written in C, it runs on Unix and Windows. Web site : http://ticemed-sa.upmc.fr/xnbc/ All recent versions are on this site. -
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nevesim
NEVESIM is an event-driven neural simulation tool.
NEVESIM is a software package for event-driven simulation of networks of spiking neurons with a fast simulation core in C++, and a scripting user interface in the Python programming language. It supports simulation of heterogeneous networks with different types of neurons and synapses, and can be easily extended by the user with new neuron and synapse types. To enable heterogeneous networks and extensibility, NEVESIM is designed to decouple the simulation logic of communicating events (spikes) between the neurons at a network level from the implementation of the internal dynamics of individual neurons. -
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TronTool
Tuning of java neuroph.org neural nets.
...Easy watch it on the screen and move the values up or down. More or less value at the output neurons. Saving, Loading from different .nnet`s. Adding comments. Changing the visible output neuron Setting wished input neurons to get visible. A small fast and easy weight version and a continuing version, which should get involved in the neuroph project. -
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flNeuronTool
A Fast Light Neuron Tracing and Editor Tool
The flNeuronTool allows users to reconstruct and proofread neuronal morphologies in light microscopy images. The system incorporates automatic tracing and manual editing of neuron reconstruction into a cooperative 3D interactive visualization-assisted environment, which is a powerful tool for analysis of complex neuronal images. -
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Black Hole Cortex
Sphere surface layers of visual cortex approach maximum info density
...Similarly, our imagination is the set of all possible things we can draw onto our most dense layer of visual cortex in electricity patterns. Bigger layers have more neurons to handle those possibilities. A Black Hole Cortex is a kind of visual cortex that has density of neuron layers similar to density at various radius from a black hole. What we think our eyes see, the imagination, is the densest and smallest layer. SphereSurfaces outside it recursively have more neurons, more surface area, but less density since it has to eventually dimension-reduce to high level ideas, like there are 10000 Wikipedia page names that cover most parts of the world. ... -
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sigTOOL provides a user-extendable signal analysis environment for processing electrophysiological data within MATLAB. Neuron spike-train, + spectral and time-domain analyses are built in. See http://dx.doi.org/10.1016/j.jneumeth.2008.11.004
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NeuroBees
Multi-agent algorithm
Software tool (NEURON, Python, C++) based on the multi-agent Bee algorithm and aiming at multi-parametric optimization. 2 versions : - Link with NEURON (need download and install NEURON and NEURON-python) - Autonomous, with two types of neurones (Izhikevich and hodgkin huxley) -
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Neuron
Hypercube Neuron.
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This code performs the finite volume numerical simulation of a general integrate and fire neuron model driven by a stochastic direct current input.
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Neurofitter is a parameter tuning package for electrophysiological neuron models. For more information please take a look at http://neurofitter.sourceforge.net
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An open-source package for analysis of neurophysiological data-- offline (vs real-time) processing of single-neuron spike trains or EEG data associated with behavior and memory processes. Currently MATLAB heavy, with some Windows specific code.
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