Search Results for "diagnostics"
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Showing 20 open source projects for "diagnostics"
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PyMC
Bayesian Modeling and Probabilistic Programming in Python
PyMC is a Python library for probabilistic programming focused on Bayesian statistical modeling and machine learning. Built on top of computational tools like Aesara and NumPy, PyMC allows users to define models using intuitive syntax and perform inference using MCMC, variational inference, and other advanced algorithms. It’s widely used in scientific research, data science, and decision modeling. -
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CausalImpact
An R package for causal inference in time series
The CausalImpact repository houses an R package that implements causal inference in time series using Bayesian structural time series models. Its goal is to estimate the effect of an intervention (e.g. a marketing campaign, policy change) on a time series outcome by predicting what would have happened in a counterfactual “no intervention” world. The package requires as input a response time series plus one or more control (covariate) time series that are assumed unaffected by the... -
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CERCA
CERCA – Citation Extraction & Reference Checking Assistant
CERCA is an open-source research tool that supports the verification of bibliographic references in scientific manuscripts. It extracts references from PDF files and checks their existence and consistency against authoritative metadata sources, producing explainable diagnostics, audit logs, and reproducible reports. It is intended for: - Researchers performing final manuscript checks - Reviewers assessing reference consistency - Editors supporting editorial quality control - Meta-research and reproducibility workflows CERCA is an experimental tool. It does not replace manual verification. ... -
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Data Envelopment Analysis using Stata
Unified Data Envelopment Analysis commands for Stata
...Extension commands provide Malmquist productivity index, window analysis, network DEA, cross-efficiency, bootstrap DEA, fuzzy DEA, and research-oriented game-theoretic DEA diagnostics. The release includes Stata help files, an OECD education application, and forthcoming Stata article and supplement materials. -
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JDiskMark
Java Disk Benchmark Utility
JDiskMark is a powerful and versatile disk benchmarking tool written in Java, designed to help measure the performance and health of your storage drives. Whether you're testing HDDs, SSDs, or network locations, JDiskMark provides reliable insights into your disk's read and write... -
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rethinking
Statistical Rethinking course and book package
This R package accompanies Richard McElreath’s Statistical Rethinking (2nd edition), offering utilities to fit and compare Bayesian models using both MAP estimation (quap) and Hamiltonian Monte Carlo via RStan (ulam). It supports specifying models via explicit distributional assumptions, providing flexibility for advanced statistical workflows. -
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pyrpl
PyRPL turns your Red Pitaya into a powerful analog feedback device.
The Red Pitaya is a commercial, affordable FPGA board with fast analog inputs and outputs. This makes it useful for quantum optics experiments, in particular as a digital feedback controller for analog systems. Based on the open source software provided by the board manufacturer, PyRPL (Python RedPitaya Lockbox) implements many devices that are needed for optics experiments with the Red Pitaya. PyRPL implements various digital signal processing (DSP) modules (see features below). It allows... -
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Skippity
Test and measurement automation for electronics, physics and more
GET INVOLVED - see General Discussion Skippity is a versatile script-based automation controller for test and measurement instrumentation. It’s ideal for use on the test bench or for automating experiments in the lab. Skippity doesn't rely on instrument specific vendor drivers so it can communicate with both legacy and current commercial instruments and also with devices you've designed and built yourself. Once you've told Skippity about your instruments and their commands using simple... -
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JLibModbus - Java Modbus Library
A modbus library implemented in Java.
...The library supports the most popular communication libraries (jssc, rxtx, jSerialComm, purejavacomm, java comm api); Maven dependency: <dependency> <groupId>com.intelligt.modbus</groupId> <artifactId>jlibmodbus</artifactId> <version>1.2.9.7</version> </dependency> Implemented MODBUS functions: 0x01 Read Coils 0x02 Read Discrete Inputs 0x03 Read Holding Registers 0x04 Read Input Registers 0x05 Write Single Coil 0x06 Write Single Register 0x07 Read Exception Status 0x08 Diagnostics 0x0B Get Comm Event Counter 0x0C Get Comm Event Log 0x0F Write Multiple Coils 0x10 Write Multiple Registers 0x11 Report Slave Id 0x14 Read File Record 0x15 Write File Record 0x16 Mask Write Register 0x17 Read Write Multiple Registers 0x18 Read Fifo Queue 0x2B Encapsulated Interface Transport (Read Device Identification interface) -
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runjags
The 'runjags' R package and standalone JAGS extension module
This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A JAGS extension module provides additional distributions including the Pareto family of distributions, the DuMouchel prior and the half-Cauchy prior. -
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GASiC
Genome Abundance Similarity Correction
...However, the majority of approaches either quantify at low resolution (e.g. at phylum level) or have severe problems discerning highly similar species. Yet, accurate quantification on species level is desirable in applications such as metagenomic diagnostics or community comparison. GASiC is a method to correct read alignment results for the ambiguities imposed by similarities of genomes. It has superior performance over existing methods. You can find the accompanying paper here: http://nar.oxfordjournals.org/content/41/1/e10.short Thanks to the great work of the SeqAn team, you can now use GASiC as a Knime workflow: https://github.com/seqan/knime_seqan_workflows/tree/master/metagenomics_gasic_workflow -
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An implementation of the Kernel-based Orthogonal Projections to Latent Structures (K-OPLS) method for MATLAB and R. The supplied functionality includes e.g. cross-validation, kernel parameter optimization, model diagnostics and plot tools.
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ActiveGEM contains a set of perl/Tk graphical interfaces for the GEMPAK meteorological diagnostics and plotting package. These research-oriented interfaces provide easy access to low-level GEMPAK functions and allow for the maximum possible flexibility.
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OOBD supports a self-programable Tool for Vehicle Onboard Diagnostics (OBD) for various platforms like the Windows-Desktop, mobile Phones and Smartphones Please note that we are actual moving this project over to oobd.googlecode.com. The software source code repository is already moved, other areas will follow.
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galprop_propel
GALPROP update for accurate propagation calculation
...Instructions: replace the four files propel.cc, propel_diagnostics, Galdef.cc and Galdef.h and rebuild the executable. Add solution_method and solution_convergence to the galdef parameter file. A test GALDEF file with these parameters is galdef_54_reltest09; the diagnostics document the accuracy of the solution. A full explanation is given in the GALPROP Explanatory Supplement http://www.mpe.mpg.de/~aws/galprop_explanatory_supplement.pdf Thanks to Deepak Khurana for requesting and testing this update. Now replaced by this project: http://sourceforge.net/projects/galprop where further updates can be found. -
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OpenMCD
Eclipse debugging tools for ecu development
OpenMCD wants to become a top-class collection of open source, eclipse based development and debugging tools for the development of electronic control units (ECUs). MCD stands for measurement, calibration and diagnostics: three activities often performed during the development of software for embedded and mechatronic systems. -
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This is a project for a tool to get more precise deontological diagnostics through x-ray images. Final Project in Tecnology in Systems Analysis and Development by Alexandre A. Severino, Gustavo T. Souza, Isabela M. Gesser and Juliano A. Felipe.
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pyOBD-II (a.k.a. "pyobd2") is a Python library for communicating with OBD-II vehicles. Its goal is to make writing programs for vehicle diagnostics and monitoring vehicle data as easy as possible. Relies on pySerial to communicate with ELM scanners.
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splitsmb is a standalone application for calculating topological convergence diagnostics on MrBayes tree-output files (unrooted only at this point). It calculates the average- and maximum standard deviations of partition frequencies between runs.
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TaskMetrics is an open source tool for On Board Diagnostics (OBD2) vehicle scanning via a ELM323 computer interface.
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