Search Results for "batch file renamer"
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Showing 22 open source projects for "batch file renamer"
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iCn3D
Web-based protein structure viewer and analysis tool
"I see in 3D" (iCn3D) Structure Viewer is not only a web-based 3D viewer, but also a structure analysis tool interactively or in the batch mode using NodeJS scripts based on the npm package icn3d. iCn3D synchronizes the display of 3D structure, 2D interaction, and 1D sequences and annotations. Users' custom displays can be saved in a short URL or a PNG image. The complete package of iCn3D including Three.js and jQuery is in the directory "dist" after you get the source code with the "Code... -
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Leiningen
Automate Clojure projects easily
... of Leiningen, try that first as long as it has version 2.x. Windows users can use the above script in the Linux subsystem or try the batch file or Powershell version instead. Most tasks need to be run from somewhere inside a project directory to work, but some (new, help, search, version, and repl) may run from anywhere. -
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astap program
Stacking program, astrometric (plate) solver, fits file viewer
ASTAP, Astrometric STAcking Program, astrometric solver and FITS image viewer. This program can view, measure, "astrometric (plate) solve" and stack deep sky images. Main features: - Stacking of astronomical images including dark frame and flat field correction - Native fast astrometric (plate) solver. - Alignment using an internal star match routine, internal Plate Solver, manual or ephemeris. - FITS viewer with swipe functionality, deep sky and star annotation,... -
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ransfoil
console to calculate airflow around an airfoil based on RANS approach
... and heat transfer and the effect of surface roughness on near wall flow are considered by this program, it can be used for engineering calculation of the friction drag and heat transfer coefficients on airfoil surface. RANSFOIL reads coordinates data from a 1D XYZ file which describes the grid points or control points on airfoil as only input, then outputs grid and solution files in 2D PLOT3D format to record grid coordinates and airflow data and a report file to show aerodynamic parameters. -
An All-in-One EMR Exclusively for Therapy and Rehab.Managing your therapy and rehab practice is a time-consuming process. You spend hours on paperwork, billing, scheduling, and more. Raintree’s Therapy & Rehab EHR is here to help you manage your practice more efficiently. With our all-in-one solution, you’ll get the tools you need to streamline your therapy and rehab practice, improve patient care, and get back to doing what you love.
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Side Cutters
Free CAD software
...#. Windows operating system functionality is never used, and the application is not on the Windows API but the GTK 3 API. This project will have no build system other than a simple *batch* or *bash* file. Its only dependency will be GTK 3. ## A table The user of the program will select components and edit the connections between them. This is done in a **table** He will press the *Generate* button with the *Side Cutter* icon and all the drawing's pages are generated automatically. -
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megatest
Run tasks/tests, get trustworthy pass/fail info rolled up
Distributed test running system. build for running simulations, quality assurance or similar where you need to run a large number of tests. Supports dependencies, iteration, disk space management and log file analysis. -
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SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
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JSiteDescriptor
Binding site descriptor generation for SVM based classification.
A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too). -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
ConnectWise Cybersecurity Management for MSPsConnectWise SIEM (formerly Perch) offers threat detection and response backed by an in-house Security Operations Center (SOC). Defend against business email compromise, account takeovers, and see beyond your network traffic. Our team of threat analysts does all the tedium for you, eliminating the noise and sending only identified and verified treats to action on. Built with multi-tenancy, ConnectWise SIEM helps you keep clients safe with the best threat intel on the market.
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grepp
An ultimate text-analysing tool
A command line tool for text file analyis, filtering, splitting and reporting. Runs under Java (1.5+), supports plugins written in Groovy. Has nix and win batch files in distributions. -
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OrthoRBH
Rapidly identify orthologous cDNA sequences in related species
OrthoRBH is a tool/pipeline designed to identify families of protein coding transcripts/genes in related species using a reciprocal blast method. It can search through databases of full-length cDNAs, ESTs or mRNA-seq data. Optional assembly of candidate sequences allows assembly of contigs. It is suited to handling a mixture of EST and mRNA-seq sequence data. It performs batch blast searches, so it is ideal for large multi-gene families. After collecting candidate sequences, it performs... -
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FishingCNV
Copy number variation (CNV) detection in exome sequencing data
FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases. -
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OMR Reader
OMR Sheets Data Retrieval Software
OMR Reader is an application to read data from scanned images of OMR sheets. You can first create a template for a particular form and save it as a .omr file. To create a template, use a form with all filled marks. The program will automatically detect the marks. Now choose the marks for a group, and name the group. Do this for all the option groups on the form. Now save the info of these groups in a .omr file. For different forms, you can have different .omr files. These files can later... -
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WaveSorter
A powerful, versatile tool for offilne spike analysis and sorting
... properties (width, etc.) can be saved to disk in simple text files. WaveSorter is written in C++, utilizes the GNU Scientific Library for all computation, and is highly parallelized; on modern hardware it can handle files containing several 100,000s of waveforms per channel with almost no noticeable loss in GUI fluidity and <1sec lags for files with >1,000,000 waveforms per channel. It can be run in batch mode. It supports a wide array of binary file formats as well as ASCII text. -
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Dress Up RNA seq
End-to-end automated pipeline of RNA seq packages for an HPC system
The purpose of DressUp is to create an end-to-end RNA seq pipeline in which all of the steps of analyzing data from an Illumina sequencer is done in one step in an HPC environment. RNA seq programs included are TopHat, CuffLinks, CuffDiff, CuffMerge, FastQC, and trimming using the FastX toolkit. DressUp facilitates RNA seq programs by streamlining various packages into a single script. That script executes the RNA seq programs on a batch cluster system. Upon execution of the script, jobs... -
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caseGen
... [BATCH], [ANALYZE] and [OPTIMIZE] cases in OpenFOAM and others
'caseGen' allows you to simplify your numerical simulation problem! Actual its not fairly tested so please contact me if you see any refinements or found bugs. -
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A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file (e.g...
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TransimsGui and makeTransims allow users to automatically generate triptables, timetables and vehicle files, edit individual control files, create batch files for transims feedback processes, run exe-control file pairs and run batch files.
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Socpipe provides a remote terminal interface for command-driven interactive programs. It is useful for controlling programs running under a batch execution environment, for example.
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GerbTool is a set of tools for modifying gerber and excellon drill files. GerbTool can be used to tile multiple gerber files as a single job, and can be run interactively or in batch mode.
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General-purpose machine-independent Perl functions and a sample MS-DOS/Windows batch file to efficiently sort arrays of strings by the numerical value of all embedded dotted-quad IPv4 addresses in each string
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Types: -Meeting with Clients -CAD dispatch -Worflow -SOA and inter network workflow -Interprocess communication -Batch jobs -Large scale integration -Manufacturing System and Systems -Personal -Employee -Project -Robot / Robots / Robotic
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