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This software is developed by Kalidas (http://openwetware.org/wiki/Kalidas_Y) as part of his Ph.D. thesis. The method enables alignment of ligand molecules considered molecular graphs. It is useful in the domain of drug discovery and bioinformatics.
CIDIAN is a very simple offline Chinese-English dictionary written in Gambas2. Lookup any character or an entire text.Almost 100000 entries. Based on the CC-CEDICT project.
fropho calculates phonon properties in crystal, which is based on Parlinski-Li-Kawazoe method. Information of forces acting on atoms when an atom is displaced is required as input information. fropho is going to be replaced by phonopy.sourceforge.net.
MASyV (Multi-Agent System Visualization) enables one to write agent-based models/cellular automata, eg. in C, visualize them in real time & capture to movie file with MASyVs GUI & message passing lib. Includes examples: Hello World, ants, viral infection
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Automated Sequence Annotation Pipeline (ASAP) is designed to ease routine investigation of new functional annotations on unknown sequences, such as expressed sequence tags (ESTs), through querying of web-accessible databases.
Coptic - English and Coptic - Czech dictionary related to Crum's coptic dictionary, written in C++, based on MySql, with Qt GUI. Is developed as part of project Marcion, containing only coptic data without study environment.
Project migrated: https://github.com/arktools
This library aims at providing a uniform method for simulation, prototyping, and testing of autonomous robots. It also adheres to the object-oriented paradigm to ease system configuration and development. http://www.youtube.com/watch?v=-wQVrM5SL2o&fe
rSIGNAL - ruby Simple Inter-Interface Generic Aggregation Layer. It allows external data sources to be aggregated, store the aggregated data and print the aggregated data out in a transformed format to a file (or integrated HTTP server) on demand.
QtNet ("Cute-Net") is a QT-based GUI frontend for the "CWSnet" hydraulic simulation toolkit. Similar in spirit to the EPAnet GUI, it is intended to provide a reasonably complete set of features for visualizing and editing hydraulic networks.
Remote monitoring and controll system for home use. Main goal is to create multilayer software for collecting data (weather data, measured data), gain remote access via web page, and controll some aspects like heating and lighting. https://flattr.com
PSIGHOS is a Java-based simulation library. PSIGHOS is focused on the simulation of business processes and comprises a parallel core so to reduce the execution time for large models.
GISpatialNet is a Java-based tool for mapping network data (nodes and edges between them) to spatial coordinates; reformatting network and spatial data together; and calculating spatial network measures.
Install by saving to c:\ drive and typing the following in a command line:
java -jar c:\GISpatialNet-0.9b.jar
A population-based method for DNA copy number analysis: recurrent copy number aberration indentification in multiple samples (with no need of single-sample calling). Developed for a quick analysis of high resolution and large population data.
Tolk is based on the Spring design pattern to Filter & Translate data from data sources eg.TCP/IP connections, text files, databases and Serial (rs232,usb,BT). Typical applications is to manipulate data and manage devices such as IPICO RFID readers
booggie brings object-oriented graph grammars into engineering - Based on the application of object-oriented graph grammars, engineering knowledge is formalized and becomes computable in order to solve design tasks.
This project provides a java implementation of the Captcha project ( see http://www.captcha.net ). A CAPTCHA is a program that can generate and grade tests that: -Most humans can pass. -Current computer programs can't pass.
Automatically produce functional annotations for prokaryotic genomes, consisting of protein name, EC number, GO terms, & TIGR role. Initial version developed by JCVI; uses BLAST hits from Panda sequence database, and HMM hits from TIGRFAMs and Pfams.