Search Results for "gnu/linux" - Page 94
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Showing 14866 open source projects for "gnu/linux"
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Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.
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TARQUIN
MRS/NMR analysis software
Analysis software for MRS/NMR data. Allows processing and fitting to be performed in a fully automatic workflow. -
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An open-source software aimed at unsupervised molecular alignment
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cxmon
Access the Phocos CX/CXN-10/20/40 solar charge controller's logger.
This is a minimalistic, portable command line tool, written entirely in BASH scripting language, for accessing solar charge controller's historical logs and current status information. It should be compatible with Phocos CX/CXN-10/20/40 solar charge controllers. It has been tested with CXN-40 operating in 12 V mode. The documentation can be found at the top of the executables. The tool is licensed under GPLv2. The protocol has been reverse-engineered on the author's own free time. The... -
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An open-source software aimed at high-throughput generation of molecular interaction fields (MIFs)
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HCS Analyzer
High Content Screening Analyzer
HCS Analyzer is an open source software dedicated to High Content Screening data processing and analysis. -
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AnyWave is a multi-platform software designed for neurologists and researchers who want to visualise and apply signal processing on electrophysiological signals. AnyWave can handle EEG, SEEG, MEG and more. MATLAB/Python/C++ plugins can be added. See this wiki section to learn how to build AnyWave on Linux : http://meg.univ-amu.fr/wiki/AnyWave:BuildSDK
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NOTE: For latest version, please visit https://github.com/ispasic/FlexiTerm. FlexiTerm is an open-source software tool for automatic term recognition. FlexiTerm uses a range of methods to neutralise the main sources of term variation. FlexiTerm is robust enough for less formally structured texts, such as those found in patient blogs or medical notes.
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IPS Framework
A simple Python framework for loosely-coupled multiphysics simulations
The IPS Framework has migrated to https://github.com/HPC-SimTools/IPS-framework The IPS framework was developed to support loosely-coupled integrated modeling of fusion plasmas (and was originally the Integrated Plasma Simulator). However, the design is quite general, and is suitable for many scientific and engineering domains. In addition to plasma physics, it is also being used in the engineering of batteries. One of the novel features of the IPS framework is its... -
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The project development has been moved on GitHub https://github.com/pcb2gcode/pcb2gcode The GUI for pcb2gcode can be found here https://github.com/pcb2gcode/pcb2gcodeGUI pcb2gcode is a command-line tool for isolation, routing and drilling of PCBs that provides full support for both single- and double-sided boards. For more information, see http://sourceforge.net/apps/mediawiki/pcb2gcode/
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lr2rmats
Long read to rMATS
lr2rmats is a Snakemake-based light-weight pipeline which is designed to utilize both third-generation long-read and second-generation short-read RNA-seq data to generate an enhanced gene annotation file. The newly generated annotation file could be provided to rMATS for differential alternative splicing analysis. More information can be found at https://sourceforge.net/p/lr2rmats/wiki/Home/ -
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Acoustic Research Tool (ART)
Acoustic Simulation Library for Frequency and Time Domain Simulations.
ART is a flexible simulation framework for wind instruments. It includes a growing library of modelling elements. So far bore discontinuities, branches, tone holes, cylindrical and conical tubes, Bessel horns and bent tubes are available for frequency domain modelling. In the time domain generic bidirectional propagation elements, scattering elements, fractional delays, convolution with reflection functions and general z-domain networks are available and can be described using MuParserX... -
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qucs2EQ
Convert Qucs Prv1 data to Audacity EQ curve xml
Convert from Qucs Pr1.v dataset to Audacity equalization curve xml. Tested with Qucs Dataset 0.0.18 and Audacity 2.0.3 -
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Inelastica
Transport code and tools based on SIESTA and TranSIESTA (DFT-NEGF)
NOTE: The Inelastica project moved to https://github.com/tfrederiksen/inelastica/ in February 2018. Pre- and post-processing tools for SIESTA (DFT, quantum chemistry) and TranSIESTA (quantum transport): (1) Calculate phonon frequencies, e-ph couplings, and inelastic contributions to the conductance (IETS). (2) Access Hamiltonian etc from Python. Some code documentation and installation instructions are available at this mediawiki page: http://dipc.ehu.es/frederiksen/inelastica/index.php. -
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BisSNP
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
Now in Github: https://github.com/dnaase/Bis-tools/tree/master/Bis-SNP BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other... -
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Bell-412
Highly realistic and immersive model for Flightgear.
This is the Textron Bell412 helicopter for the Flightgear flight simulator. This rotorcraft is designed in order to provide the most realistic flight experience to player, including design and behaviour. This project is updated every 1 to 6 months with major improvments. Keep updated and happy Flightgear. My Youtube Channel: https://www.youtube.com/channel/UCmxlWKtFn19wYVe2DYU9XCw/videos v0.9.1- r54 released Feb/2018 : * FDM: updated. Better IT. * MODEL: new texture & model... -
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SiBELia
Synteny Block ExpLoration tool
Sibelia: A comparative genomic tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. -
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Trasforma coordinate SIAN
Trasforma coordinate da epsg per google maps
Il programma TrasfSianItalia, da usare con javaproj scaricabile anch'esso, è nato dalla necessità di trasformare le coordinate visualizzate sul SIAN. Il programma si occupa semplicemente di effettuare la trasformazione delle coordinate per i codici epsg e di visualizzarle su Google maps. Le coordinate trasformate si possono salvare e stampare. Richiede java 8 per funzionare. Per installazione completa cliccare su browse all file e scaricare TrasfSianItalia35.zip. Per gli aggiornamenti... -
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Capsim(r) C Text Mode Kernel(TMK),DSP and communication blocks, topologies, libraries and tools for the development of high performance block diagram digital signal processing and communications systems,built in interpreter for scripting.SystemC support.
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General purpose dataflow programming language.
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TOFSIMS
R/Bioconductor toolkit for mass spectrometry data
The tofsims project is an R/Bioconductor toolkit designed for processing, analyzing, and visualizing imaging mass spectrometry data from Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) instruments. It supports importing raw and preprocessed data from popular instrument platforms (e.g. IONTOF, Ulvac-Phi) and provides methods for mass calibration, peak picking, and peak integration. The package allows transformation of spectra into 2D image structures (mass images), with operations... -
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DockoMatic is a GUI application that is intended to ease and automate the creation and management of AutoDock jobs for high throughput screening of ligand/receptor interactions.
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FullFun
A software package for fullerenes and their functionalized derivatives
FullFun (stand for Fullerene Functionalization) is an open source software package, licensed under the GNU General Public License (GPL). It provides an efficient and easy way to generate, analyze and predict fullerene-related structures. The package consists of four programs: CSIOpt, XSI, XSIOpt and bkcage. They are implemented using the C and C++ languages and distributed under an open source licence. The code can be compiled and executed on Linux, Mac OS X and Windows (via DOS) operating systems. ... -
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aXonica
An installation package for freeware bioimaging tools
Download link: https://www.dropbox.com/s/jelbrho05m7yg8y/NeuroX_v.1.0.zip?dl=0 For Instructions Manual see Download section.