Search Results for "process" - Page 9
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Showing 374 open source projects for "process"
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The FAKE GAME tool uses natural evolution to evolve Data Mining models. It incorporates several preprocessing, optimization and visualization methods aimed to streamline the Knowledge Discovery process. Knowledge Extraction from data is being automated!
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A web-based interface for the Hadoop MapReduce framework that simplifies the process of writing and running MapReduce jobs. Aimed at introducing parallelism concepts in introductory computer science courses.
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Decision Table Preprocessor
Ccide is a Decision Table preprocessor.
Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other errors. Input example: //DECISION_TABLE: // 1 3 2 2 | light == $$ /* 1=red, 2= yellow, 3=green. */ // N - - - | speed == STOPPED // - - Y - | speed == SLOW // - N - Y | speed == FAST // ______|___________________ // X - X - | Stop(); // - - - X | SlowDown(); // - X - - | SpeedUp(); //END_TABLE: -
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CUO
Codon Usage Optimizer
...The main function of the software at the current development stage is to optimize genes to be transformed into the Chlamydomonas reinhardtii chloroplast genome although it can be used to optimize genes into other hosts as well. The main tool in CUO, Moptimizer, introduces a semi-automatic way of gene optimization which provides more flexibility and accuracy during the optimization process. The future plan for CUO is to be developed into a multipurpose bioinformatics software where data, findings, planning and learning in biology labs can be created and shared at finger tips. -
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egrsa
rsa-elgamal comparison
compare time of process between rsa and elgamal algorithm used to encryption and digital signature. -
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easyslice
3d printing software
Easyslice is a software for stereo lithography 3d printing. You can preview your 3d model (.obj) ant then launch the printing process wich slice your model then display it in realtime with opengl and command your hardware. -
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The Self-Organizing Map Maker for Education and Research. Features include 3D-visualization of the training process, various 2D and 3D map topologies, easy extensibility to additional topologies.
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Cantharella
Pharmacochemical database of natural substances
The information system (IS) “Cantharella: Pharmacochemical database of natural substances” share and sustain pharmacochemical data of all organisms collected for the study of their natural substances, with a controlled access via internet. -
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MySciTools
My scilab tools
Repository of "my" public contributions to Scilab software Sourceforge ATOMS repository of my dev. for Scilab software Many modules available To add ATOMS repository to your Scilab 5.4: atomsRepositoryAdd('http://myscitools.sourceforge.net/5.4') see https://sourceforge.net/p/myscitools/wiki/Home/ for more information. -
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u/sbmv2012
Taxonomy assignment of metazoans using a python based pipeline
The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database. -
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Primer Design Tool
Design PCR primers
A simple tool to design DNA primers for mutagenesis in BGME lab (JHU). Allows users to select or enter background sequence and add current and new mutations. During the design process, users are presented with various updating checks to guide them. -
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EyeMap is a visualization and analysis tool for text reading eye movement data. It can process Unicode, proportion/non-proportion and spaced/unspaced reading materials, which supports various languages and experiment methods.
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HOPSA, high oxygen pressure sputter automation, is a Python 3 project to control a step wise sample creation Process. Although written for this specific task it is easy to adopt for any experimental task which changes hardware parameters and waits for a specific condition before proceeding. The graphical interface (QT4) includes plotting (matplotlib), instrument configuration/monitoring and a program step creator. The communication with the hardware is independent of the GUI and any number of devices can be selected. ...
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Linking Yabi with RDA
This software system enables publication of YABI workflows to the RDA.
Modern life science research requires bringing together Biology and Information technology. To help make this process easier, the CCG has developed YABI, an Internet based workflow application that is aimed at biologists who wish to conduct bioinformatics analysis. YABI integrates bioinformatics tools and data via an intuitive workflow creation and management environment. YABI can be used to access the NCI-SF in Bioinformatics and the tools available through the Embl Australia EBI mirror hosted at the University of Queensland. ... -
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QUASR
Cross-platform NGS processing and analysis pipeline in Python
QUASR is a lightweight pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is written in Python3. 7.X is my rewrite in Java, but is still work in progress. ... -
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PHN/LAB file format converter
Convert the format of speech label files
...Do this: 1- Provide the source directory (directory where the original label files are). 2- Provide the destination directory (directory where the new label files will be placed). 3- Select the operation, either phn->lab or lab->phn. 4- Press the Process! button. -
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The ntcc bounded-time Model Checker
to prove if a CLTL formula satisfy a ntcc process
The ntcc bounded-time model checker allow you to check if constraint linear time (CLTL) formulae satisfy a Non-deterministic Times Concurrent Constraint (ntcc) processes. Try it! -
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CRFSharp
CRFSharp is a .NET(C#) implementation of Conditional Random Field
...Currently, when training corpus, compared with CRF++, CRF# can make full use of multi-core CPUs and only uses very low memory, and memory grow is very smoothly and slowly while amount of training corpus, tags increase. with multi-threads process, CRF# is more suitable for large data and tags training than CRF++ now. For example, in machine with 64GB, CRF# encodes model with more than 4.5 hundred million features quickly. -
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OpenRecon
OpenRecon is an open-source software library for image reconstruction.
Moved to https://bitbucket.org/bid/openrecon -
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Ruleminer is an experimental tool for performing various data-mining tasks, especially focused on searching for association rules. The aim is to research the association rules mining process and to develop new approaches for solving the related problems.
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totaldepth
Petrophysical data processing and presentation.
TotalDepth is an Open Source, cross platform, software collection that can process petrophysical data from the oil field such as wireline logs, seismic data and so on. Conventional, proprietary, software for petrophysical data tends to be expensive to licence, restrictive, slow to develop for and tied to expensive hardware. TotalDepth changes all of that. TotalDepth is open and cross-platform, and produces results straight to the bowser. -
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ASpipe is a pipeline to process GeneSeqer/GMAP alignments and identify alternative splicing (AS) events from the alignments. It requires unix bash, perl 5.0+ with DBI module and MySQL5.0+ to run properly.
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MantelTester is a GUI to easily perform mutual Mantel Tests on any number of input matrices, process the results and put all that together in a standard report.
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eMayor provides process and applications that enable the cheap, secure and sustainable realization of standard e-government services, everything from processing a change of personal information to issuing certificates or licenses.
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GAPworks is the online publication system developed in the GAP project (funded by the DFG). GAPworks provides the necessary infrastructure for online publishing (including a peer-reviewing process).
