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Diversity Maps is a data visualization tool for plant geneticists and breeders. It generates publication-quality, vector-based chromosome maps displaying differences in marker states between individuals.
This is a Python program based on the NegEx algorithm that detects the polarity of the clinical evidence in clinical random trials.
If you use this code please cite this paper:
P. Davis-Desmond and Diego Mollá. Detection of Evidence in Clinical Research Papers (2012). Australasian Workshop On Health Informatics and Knowledge Management (HIKM 2012), Melbourne, Australia.
http://www.ics.mq.edu.au/~diego/publications/hikm12.pdf
"MITO - Medical Imaging TOolkit" is an open-source, Windows-based software architecture for advanced Medical Imaging. Main characteristics are: DICOM compliant, 2D/3D/S3D visualization, image segmentation and fusion, ROI, advanced 3D user interface
Bioinformatics Perl extension for the analysis of antibody variable domain repertoires. Suitable for mammalian repertoire sequences obtained either by Sanger or 454 sequencing. Methods published in Glanville, Zhai, Berka et al, PNAS 2009.
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A complete OpenCascade - OCAF based CAD framework.Note that this is not the original SALOME GEOM project but an effort to create a standalone framework based on the existing one from SALOME project, with the addition of extra functionality.
SolSNP is a Java-based DNA variant calling tool for Next-Generation Sequencing alignment data. SolSNP uses a modified Kolmogorov-Smirnov statistic and data filtering to confidently and quickly call variants on high-coverage aligned genomes.
It's a modern take on desktop management that can be scaled as per organizational needs.
Desktop Central is a unified endpoint management (UEM) solution that helps in managing servers, laptops, desktops, smartphones, and tablets from a central location.
RepMiner takes a graph theory approach to the classification and assembly of the repetitive fraction of genomic sequence data. Sequence lengths analyzed by RepMiner can range from full length transposable elements to low coverage sample sequence data.
WSNWARE is an open source Java/OSGi middleware, designed for monitoring, controlling and standardizing Wireless Sensor Network. WSNWARE is a normalized message oriented middleware running on (and developed for) any OSGi containers.
This project aims to provide a ground truth generator for visual hand tracking and full pose-recovery problems. The system generates ground truths based on virtual models, and provides as an output depth, full segmentation of joints, and much more.
VetoSys is a management system that includes whole veterinary clinic management : animals, owners, account controls... You can use this tool to achieve its sales to the fund, its orders for products or veterinary services. A module for inventory are available.
The LCMS(Lucid Core For Medical Simulation) project
It´s actually based on my thesis for Master´s degree, LCMS will be an LGPL covered Open Source framework targeted at easy and fast
Medical Simulation development.
JEuclid is a complete MathML rendering solution, consisting of: a MathViewer application, command line converters from MathML to other formats, an ant task for autmated conversion, display components for AWT and Swing and a component for Apache Cocoon
Software for optimization of multi modal, multi dimensional functions based on SOMA algorithm. Program is implemented on top of hadoop, and is especially well suited for functions with high computational times because of its distributed nature.
The Wikipedia Miner toolkit provides simplified access to Wikipedia. This open encyclopedia represents a vast, constantly evolving multilingual database of concepts and semantic relations; a promising resource for nlp and related research.
GeoMondrian is a "spatially-enabled" version of Mondrian. GeoMondrian brings to the Mondrian OLAP server what PostGIS brings to the PostgreSQL DBMS, i.e. a consistent and powerful support for geospatial data. It also provides geo-extensions to MDX.
HanNanum is a Korean Morphological Analyzer and POS Tagger. A plug-in component-based architecture is adapted to the new Java version for flexible use. You can find the work flow for morphological analysis, POS tagging, noun extraction, etc.
Contact:
kschoi@kaist.ac.kr
hjjeong@world.kaist.ac.kr
MetaCoDe is an open source project which purpose is the automated semantic tagging of medical texts, based on the UMLS metathesaurus. Targeted languages are French and English languages in the first time.