Search Results for "open source assembly software source code" - Page 80

Showing 4660 open source projects for "open source assembly software source code"

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  • 1

    denovo_solid_pipeline

    Pipeline for small genome assembly using SOLiD sequencing technology

    denovo_solid_pipeline (DSP) is a semi automated pipeline for short genome assembly using SOLiD sequencing data. The main features of the pipeline are the optimization of the number of read-correction runs and computational resources via dynamic programming. DSP also has the advantage over the currently available pipeline (denovo2) of generating more contigs suitable for further assembly steps, increasing the chances of detecting sequencing errors and/or polymorphic sites.
    Downloads: 0 This Week
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  • 2
    C++ Airline Travel Market Simulator
    That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
    Downloads: 0 This Week
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  • 3

    HypoPhen

    A hypocotyl phenotyping software

    This is a semi-automatic high-throughput hypocotyl phenotyping software. It takes as input time-lapsed images of hypocotyls and measures their elongation and bending
    Downloads: 1 This Week
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  • 4
    comStudio

    comStudio

    Serial communication utility

    ...With COM studio is possible to create a set of command frames to be sent to the COM port and decode the answers coming from the device. The serial protocol can be fully customized with a graphical user interface. This software is OPEN SOURCE and released under GPL license so you can feel FREE to use, copy, share, (but above all) to study, analyze and modify it as you like (within the terms of the license). If you like, hate or simply use this software, if you find any bug or have any request, please do not hesitate to let me know through the services offered by the site that hosts the project or through my Facebook page (http://facebook.com/koalakoker). ...
    Downloads: 0 This Week
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  • 5
    QMC Logic Minimizer

    QMC Logic Minimizer

    combinational logic functions minimization

    QMC Logic Minimizer is a versatile application for fast simplifying truth and reduce lines tables. This program offers a comfortable user interface for generating and minimizing of the combinational logic functions. It is unique for its possibility of minimizing several functions at the same time. This program is intended for practical digital devices constructors as well as formal scholars and academics. Features: - You can minimize up to 16 input variables and up to 16 output...
    Downloads: 1 This Week
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  • 6

    ArduinoPulseGenerator

    Generate pulse trains using an Arduino

    ArduinoPulseGenerator is a simple program for generating pulse sequences using an Arduino. There is an associated GUI that runs on the local computer, or you can simply connect to the Arduino with a serial console (9600 baud) and send it commands. This code has been tested on the ArduinoMega 2560 (timing accuracy ~ ±200 μs) and Arduino Due (timing accuracy ~ ±35 μs); it may work on other Arduino boards but this has not been tested.
    Downloads: 0 This Week
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  • 7
    Python software to control Bronkhorst flow controllers via RS232. Works via USB serial converter too.
    Downloads: 0 This Week
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  • 8
    Transliterator between any Language files - Map Fonts, Create Encoding Scheme, Input Phonetic, Indian, Roman, Tamil, Hindi, English, French, German, Spanish or Any World Language Keyboard. Ex: [Phonetic Input]-[Any World Language Output] or ViceVersa.
    Downloads: 0 This Week
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  • 9

    Topographica

    Simulation software for brain modelling

    Topographica is a neural modeling package developed in a Human Brain Project grant from NIH. Topographica helps neuroscientists and computational scientists simulate and understand how topographic maps contribute to brain function. Topographica is now primarily maintained at github.com; see https://github.com/ioam/topographica for recent updates and releases.
    Downloads: 0 This Week
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  • 10
    This is a Matlab software package for single molecule FRET data analysis.
    Downloads: 2 This Week
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  • 11

    Java Evolutionary Computation Library

    As of 2012-12-18, this project may now be found at Google Code.

    As of 2012-12-18, this project may now be found at http://http://code.google.com/p/paba JECO is a Evolutionary Computation Library deveoloped in Java. It includes a variety of evolutionary optimization techniques such as genetic algorithm, genetic programming, evolutionary mapping methods, particle swarm optimization, ant colonies, etc.
    Downloads: 0 This Week
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  • 12
    GPX is mainly a physics engine, written in C++, focused on real time simulations. Project also provides a graphics library, built on top of SFML. Physics part is independent from graphics library and can be used with any other front-end.
    Downloads: 0 This Week
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  • 13

    ossGathering

    ossGathering collects information of the open source software.

    ossGathering collects information of the open source software. And shows the information that is collected in a variety of ways.
    Downloads: 0 This Week
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  • 14
    ACADO Toolkit

    ACADO Toolkit

    Toolkit for Automatic Control and Dynamic Optimization

    ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface. The object-oriented design allows for convenient coupling of existing optimization...
    Downloads: 0 This Week
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  • 15

    MCloudSim/NovaCloudSim

    a distributed cloud simulator written in Java

    MCloudSim(formerly called NovaCloudSim) is a simulator written in Java for geographically distributed clouds. The software is modified from CloudSim 3.0, which is an open source data center simulator. All functions of CloudSim are reserved, and our newly added files are in the package org.cloudbus.cloudsim.nova. MCloudSim has following characteristics: (1) The overlay protocol can be freely replaced, and we have already ported Pastry, Kadmelia, Chord from PeerSim; (2) A Petri-Net workflow theory based task model is implemented to simulate distributed tasks; (3) A distributed cloud can be easily built by assembling and expanding the basic resource entities provided by the simulator...
    Downloads: 0 This Week
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  • 16
    SunlightLB is an open-source 3d lattice Boltzmann code which can be used to solve a variety of hydrodynamics problems, including passive scalar transport problems.
    Downloads: 0 This Week
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  • 17
    Qthid Funcube Dongle Controller
    Qthid is a simple controller application for the Funcube Dongle Pro and Pro+ software defined radio receivers. It is written using the Qt SDK and is available for Linux, Windows and Mac OS X.
    Downloads: 4 This Week
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  • 18
    MuPuPriNT

    MuPuPriNT

    A primality/compositeness tester for different types of numbers.

    MuPuPriNT (Multi-Purpose Prime Number Tester) is a primality and compositeness tester for many different types of numbers. It is basic, yet full-featured, and offers several different testing methods for each type of number. MuPuPriNT is built on the GNU Multiple-Precision (GMP) integer + rational library, and is available for Windows, OS X, and Linux. Source code is available as well, and can be built on any machine with Qt installed. As of version 2.0, MuPuPriNT is built on the...
    Downloads: 0 This Week
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  • 19
    VaMoLà - Monitor
    VaMoLa Monitor is a tool to monitorize sites accessibility
    Downloads: 0 This Week
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  • 20

    Piklab

    IDE for PIC microcontrollers

    Piklab is an integrated development environment for applications based on PIC and dsPIC microcontrollers. The GNU PIC Utilities, SDCC, PICC, PIC30 toolchain, ICD2 debugger, PICkit1, PICkit2, PicStart+, GPSim and most direct programmers are supported.
    Downloads: 16 This Week
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  • 21
    Manus Arm Emulator
    This program is designed to emulate the Manus Arm created by Exact Dynamics (www.exactdynamics.com) to allow users, hobbiests, Universities, etc. to have an opportunity to develop software for this robotic arm. Please grab the source from SVN.
    Downloads: 0 This Week
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  • 22

    colonyzer image analysis software

    Image analysis estimating cell density in arrayed microbial cultures

    Image analysis software for quantification of cell density in microbial cultures (e.g. S. cerevisiae) growing on solid agar plates. Specialises in detection of extremely low cell densities. Forms part of the Quantitative Fitness Analysis (QFA) workflow: http://research.ncl.ac.uk/qfa/ Suitable for high-throughput, genome-wide analysis of culture libraries when combined with the following qfa R package: http://qfa.r-forge.r-project.org/ This is the version presented, used and...
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  • 23
    Carnaval est un logiciel destiné au calcul de masques et d'ensoleillement. La version actuelle permet de calculer les trajectoires solaires et les masques de terrain liés au relief (modèle issu des données SRTM). Les développements ont été repris par Sober Software. Merci de visiter ce site pour télécharger la dernière version et accéder aux nouvelles fonctionalités : www.sober-software.com
    Downloads: 6 This Week
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  • 24

    OFR Analysis Tool

    For the analysis of output data from the OFR method

    The OFR method is a type of steered molecular dynamics method for determining potentials of mean force (PMF) (Phys. Rev. E, 2011, 83: 021114) and local diffusion coefficients, D(z) (Phys. Rev. E, 2012, 86: 036707). OFR-AT is a fast and convenient program for analyzing large output data files from the OFR method, and returns the information necessary to quickly and easily calculate the PMF and D(z) in a spreadsheet. The software is described in detail in the following article: J. Comp....
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  • 25
    Dutch sentiment analysis engine

    Dutch sentiment analysis engine

    Een module om de sentiment van een stuk Nederlandse tekst to bepalen

    This application was developed by Incentro to satisfy requests by clients for a sentiment analyser for the Dutch language. It is currently in it's alpha stage and we expect to have a beta release by November 2012. If you would like to help with the development or testing of this product please contact us at +31[0]15 76 40 750 - of info {at} incentro.com. Deze applicatie is ontwikkeld door Incentro om te voldoen aan klantaanvragen voor een sentimentanalyse module voor de Nederlandse taal....
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