Search Results for "open source assembly software source code" - Page 69
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Showing 4652 open source projects for "open source assembly software source code"
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VOpR
VOpR - a virtual optical rail
VOpR - A Virtual Optical Rail VOpR allows to create and evaluate simple optical systems, in which the basic optical elements are arranged along the optical axis. The current supported optical elements are: spaces,spherical lenses, circular apertures and flat blocks of some optical medium. The program has three main components: 1. The database editor. Currently the database can store data about: -optical materials, -spherical lenses, -projection properties of light sensors and... -
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Quantum Chemistry Import Tool is a django application that parses the output file of quantum chemistry software as NWChem, Octopus, Gaussian, etc. The result can be saved in relational database.
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openfablab
Open Source FabLab Project
Software script assembly to be executed on cnc machines and robots to build, maintain and replicate open source fablab. Here software meets hardware. -
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simple routing
Simplistic templace header for c++ based pathing or routing.
Designed to be a simple light weight and easily accessible way of mapping pathing information to a unlimited number of objects. The template is also designed to keep a minimum profile when idle, and efficient as possible means of updating a network. Not limited to, but primarily envisioned to give game developers with limited knowledge of higher-grade routing protocols a out of the box means for pathing. -
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OrthoRBH
Rapidly identify orthologous cDNA sequences in related species
OrthoRBH is a tool/pipeline designed to identify families of protein coding transcripts/genes in related species using a reciprocal blast method. It can search through databases of full-length cDNAs, ESTs or mRNA-seq data. Optional assembly of candidate sequences allows assembly of contigs. It is suited to handling a mixture of EST and mRNA-seq sequence data. It performs batch blast searches, so it is ideal for large multi-gene families. After collecting candidate sequences, it performs... -
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IterInt is a numerical integration package that implements iterated numerical integration methods. Iterated methods can be used to compute low dimensional (less than ten, for example) integration problems to get very accurate results.
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PASHA: Parallelized Short Read Assembly
One of the fastest parallel short read assemblers for large genomes.
PASHA is a parallel short read assembler for large genomes using de Bruijn graphs. Taking advantage of both shared-memory multi-core CPUs and distributed-memory compute clusters, PASHA has demonstrated its potential to perform high-quality de-novo assembly of large genomes in reasonable time with modest computing resources. Our evaluation using three small real paired-end datasets shows that PASHA is able to produce better assemblies with comparable genome coverage and mis-assembly rates... -
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ONTODerm is a specialty specific ontology for dermatology to integrate dermatology with medical software systems.
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Time-Evolving Block Decimation
TEBD simulates the dynamics of entangled quantum many-body systems.
Time-Evolving Block Decimation (TEBD) is a new method for efficiently simulating the dynamics of entangled quantum many-body systems. It is especially suited to one-dimensional systems governed by a Hamiltonian made of local interactions. Open Source TEBD is a package, written in Fortran 95, which allows one to simulate the entangled quantum dynamics of a one-dimensional system governed by a Hamiltonian made of local interactions using TEBD. Expectation values and correlation functions, as well as entanglement measures and entropies, can be calculated. By propagating in imaginary time, TEBD can also be used to find the ground state of a given Hamiltonian. ... -
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ivl
A C++ template library extending syntax towards mathematical notation
ivl is a full-header template C++98 math library with convenient yet powerful syntax. It extends classic C++ syntax towards mathematical notation while making use of the language's elements like classes, structs, operators and functions. Expression written using ivl are excessively optimized. In other words, ivl allows writing simpler and more expressive statements using math-like formulas while taking care of optimizing them. ivl features arrays, tuples and custom function-like... -
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Ellipt2d is a finite element program for solving second order, real and complex, two-dimensional elliptic problems with user-defined operators. Because Ellipt2d is written in Python, the code can easily be adapted for specific problems.
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JSci - A science API for Java
A science API for Java
JSci is a set of open source Java packages. The aim is to encapsulate scientific methods/principles in the most natural way possible. As such they should greatly aid the development of scientific based software. -
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Framework for individual and population genome assembly and discovery of genetic variants from sequence reads.
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Evidence bucket
A minimalist cross-platform transcription software
This project was moved to https://code.google.com/p/evidence-bucket/ -
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Interdependent Java frameworks: AMath (abstract numbers support); AFuzzy (fuzzy numbers and methods); AMathSys (flexible solvers of linear and nonlinear algebraic and differential equations); ADSM (multi-criteria ranking and grading of alternatives).
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MathX
Fixed-length Arithmetic-types library
MathX is a fixed-length arithmetic-types written in pure c++ templates. The goal is to provide signed-integer, unsigned-integer, IEEE-754 float-point and fixed-point types, all with specific number of bits. To this moment, only signed-integer and unsigned-integer are completed for little-endain architecture. Any compiler that support c++03 or c++11 can successfully compile MathX. Refer to README for more information. -
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mojo
mojo provides fast analyzes for your business processes
mojo is a standalone software and library for the fast analysis of business processes. Because of its lightweight architecture and its implementation in Java, it can be used as extension in your program, e.g., business process designer. It provides new researched compiler-based analysis techniques which supports very good failure location. The software can be used under the GNU Lesser General Public License (LPGL): http://www.gnu.org/licenses/lgpl-3.0.txt -
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Language Constructor
Complete tool for constructing/manipulating languages in digital form
With this tool you can easily design a new language, digitize an existing one or incrementally reconstruct an ancient language. It allows for free experimentation of all aspects of the language, so it does not have to be made consistent on paper first. You can edit script, syntax, grammar, morphology, lexicon and phonology, as well as write documents in the language, as it might be too complex to be handled by current font technology. The information is stored in xml format for easy... -
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eHealth Charter
GUI for the coocking hacks eHealth
GUI for the cooking hacks eHealth Biomedic Sensor Platform. It reads the data through the USB. -
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Nuclei
Feature rich GUI for nuclear decay schemes
Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. Nagl, et al., NIM A 726 (2013),... -
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E.N.M.L. means Environmental Noise Model Language. The target of the project is the definition of a XML specification model mainly devoted to electronic acoustic data exchange. ENML aims to format ANY kind of noise measurement.
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surfit is an open source and free gridding and contouring software. surfit can do interpolation/approximation of points, contours and surfaces, can take fault lines and trend surfaces into account, can use inequalities and other conditions. Supports a lo
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CADET
Chromatography Analysis and Design Toolkit
We have moved to GitHub: https://github.com/cadet The Chromatography Analysis and Design Toolkit (CADET) is developed at the Institute of Bio- and Geosciences 1 (IBG-1) under supervision of Prof. Eric von Lieres. The core of the CADET software is a fast and accurate solver for the General Rate Model (GRM) of packed bed liquid chromatography. The CADET solver covers a wide range of GRM variants, combining different transport and binding models with state-of-the-art mathematical algorithms... -
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WOLFSIM: Wideband Optical FDTD Simulator
FDTD Electomagnetic Wave Simulation Software
WOLFSIM is a Finite-Difference Time-Domain electromagnetic simulator, designed to be easy to use but still very powerful, developed and maintained by researchers at North Carolina State University. It's features include: -1D, 2D, and 3D structures that are periodic in 1 or 2 dimensions -Materials that are anisotropic in permittivity and conductivity -Obliquely incident sources -Built-in vectorial (i.e. full polarization) near-to-far-field transformation See these...