Search Results for "linux file parser" - Page 65

A command line tool that allows a semi-automated scientific articles management. It assumes an existence of a directory of a specific format in the file system. The tool interprets the data stored in the directory (called a repository), extend it via the usage of some automatic tools such as pdftotext, and search the text as well as some metadata.

GeoSciPy is a set of C and Python functions that provide an API for all aspects of Geoscience and Remote Sensing Applications. Functions include reading/writing of many data formats, images, vectors, ..., and processing of images, vectors, ... including map projections, ... The library is written C, using HDF5 as the file format for storage of all remotely-sensed data and ancillary data, as well as processed data. The C functions assume a particular format for the HDF5 file contents, and...

tokyosh is a new kind of login shell. it knows user's context or other environment, and statistically learns command-line input or command usage tendency, user-space-file-name tendency(and anything else). of course it's been developing in Tokyo.

trimAl can consider several parameters, alone or in multiple combinations, in order to select the most-reliable positions in the alignment. These include the proportion of sequences with a gap, the level of residue similarity and, if several alignments for the same set of sequences are provided, the consistency level of columns among alignments. Moreover, trimAl allows to manually select a set of columns and sequences to be removed from the alignment. trimAl implements a series of...