Showing 4339 open source projects for "java"

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  • 1

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans (EJB) 3.0. The data exploration app is an open source business intelligence product called JasperServer (version 3.7), customized through supported configuration changes. ...
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  • 2
    Library of Java code to interact with the data-recording formats (RPFITS and PSRFITS) used at the Australia Telescope National Facility (ATNF). It also provides tools for extracting metadata from the files for supply to Virtual Observatory instances.
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  • 3
    NGSEP

    NGSEP

    NGSEP (Next Generation Sequencing Experience Platform)

    NGSEP is an integrated framework for analysis of short and long DNA high throughput sequencing reads. The current version provides functionalities for both de-novo and reference guided analysis of sequencing data, including genome assembly, read mapping, variants detection and genotyping and de-novo analysis of data generated from reduced representation protocols. NGSEP also provides modules for analysis of genomic variation databases (VCF files), including functional annotation, filtering,...
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  • 4
    This is a Java library, which gives low level access to the WS300 weather station from ELV (http://www.elv.de/). There is a web frontend included which displays the weather data in a browser. The following hardware is supported: * WS300 PC (USB) * IPWE1 (LAN) * Raspberry Pi with FS20WUE (LAN)
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  • 5
    ASALI

    ASALI

    ASALI is an open-source code for chemical engineers

    Do you work with chemical reactors? Are you curious about them? ASALI is the open-source code that you are looking for. Chemical reactor models, transport/thermodynamic properties of gases, equilibrium calculations. ASALI couples all these features with an user friendly graphical interface. Modeling chemical reactors has never been so easy.
    Downloads: 3 This Week
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  • 6
    SCADA-LTS

    SCADA-LTS

    A comprehensive Supervisory Control, Data Acquisition, and Execution

    SCADA-LTS is an advanced FOSS, web-based, multi-platform environment designed to build your own Supervisory Control, Data Acquisition, and Execution ecosystem. Its architecture provides a robust foundation for complex industrial automation and monitoring. Optimized for Smart Infrastructure, it is highly capable of managing industrial PV/BESS, Smart buildings, municipal Water networks or Wastewater treatment, ANPR telemetry, City-wide lighting, and other diverse data administration...
    Downloads: 17 This Week
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  • 7
    AstrolabiumPlus

    AstrolabiumPlus

    Virtual Planetarium and other Astronomical Calculation Routines

    Virtual Planetarium and other astronomical calculation routines of the Positional Astronomy (Ephemeris Calculation / ISS Visibility / Eclipses / Calendar) --- GUI based on Delphi/Free Pascal, Source Code alternatives based on Python 2.5 and Java 1.6
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  • 8
    jSNARK is an extensible programming system designed to help researchers interested in developing and evaluating algorithms for reconstructing 2D, 3D and even 4D (the extra dimension is time) images from their projections.
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  • 9
    Krishnamurti's Book of Life D.Thoughts

    Krishnamurti's Book of Life D.Thoughts

    Jiddu Krishnamurti's Book of Life|Libro de la Vida

    FREE distribution of the JAVA-XML multiplatform e-book about Jiddu Krishnamurti's Book of Life (a witty daily cookie-like reflection). Ahora, lea diariamente los pensamientos de Krishnamurti en castellano- Obtenga una agenda gratis.
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  • 10

    covid19-de-stats

    Statistiken zu COVID-19 in Deutschland

    Tägliche Statistiken und zugehörige Programme zur Darstellung der Verbreitung von COVID-19 in Deutschland.
    Downloads: 0 This Week
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  • 11
    JMEScriptGUI

    JMEScriptGUI

    Pequeño IDE para el lenguaje JMEScript.

    Con este IDE podrá probar cualquier script escrito en JMEScript con toda la funcionalidad del lenguaje, incluidos gráficos 2D y conexión MySQL. La versión para Android, en este momento, tiene menos funcionalidad y ejecuta la versión 0.1 de JMEScript. Parser JME y lenguaje JMEScript en https://sourceforge.net/projects/jme/ Documentación en https://morenobarrientos-jme.site44.com/ Código fuente y UDL para Notepad++ en pestaña 'FILES'
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  • 12

    Biogenesis Color Mod

    Mod for evolution simulation and artificial life program Biogenesis

    You can download the Color Mod at the Biogenesis main site too (included in the main download now). You also find the sourcecode there. If you want to post a review, remember that this is only a modification, so comment on my changes, not on the simulation. Original project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ Includes Tyler Colemans "Features Mod": https://sourceforge.net/projects/biogenesisfeatu/ Biogenesis discussion...
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  • 13

    Billiards Covers

    This zip jar contains the current coverings of periodic paths.

    Researchers, Mathematicians and Enthusiasts. Download "Billiards Covers" to see the most current list of periodic paths in triangles. Download "Billiards Everything" to discover new periodic billiard paths, an unresolved problem from 1775! Follow "The Great Periodic Path Hunt" at gwtokarsky.github.io for the latest news. Email tokarsky@ualberta.ca for feedback.
    Downloads: 3 This Week
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  • 14
    CPSeis is the open-source version of ConocoPhillips' former seismic processing system. Uses Fortran 90 and C/C++ layers for I/O. The new system was designed using an MPI-parallel model and works well on Linux clusters or on individual workstations.
    Downloads: 1 This Week
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  • 15
    miRDeep*

    miRDeep*

    MiRDeep*

    Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction.
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    Downloads: 1 This Week
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  • 16
    No-code system is for the visual creation of structural-functional models and the automatic generation of R language simulation models. The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g....
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  • 17
    In addition to computing co-expression clusters, Maccu fishes potential co-expressed genes for a given bait set. All results can be further processed via graph-level operations so that we can compare graphs based on different reference data.
    Downloads: 0 This Week
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  • 18

    GOBU

    Gene Browsing Utility

    Gene Ontology Browsing Utility (hereinafter, GOBU, pronounced as "go-boo") is a browsing and manipulating tool for Post-Pipeline genetic data, especially useful for data with GO annotations. With help of GOBU, we expect biologists and their cooperating technicians can pay less effort on common programming stuff. At the same time, GOBU provides an Extendable Architecture which guarantees the possibility of 1. Arbitrary Data Description, 2. Data Integration, and 3. Extendable User Interface.
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  • 19
    WxTools (Weather Data Tools)

    WxTools (Weather Data Tools)

    This package collects Fine Offset and Oregon Scientific weather data.

    WxTools (Weather Data Tool Suite) is a collection of software for collecting and displaying weather data from various weather stations. The software works with the Fine Offset WH290 and similar models (including clones such as the Pro-Signal PSG04173). It also works with the Oregon Scientific WMR180 weather station (and probably similar models such as the WMR88 and WMR100) as well as the older WMR928. Sample weather data is provided.
    Downloads: 1 This Week
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  • 20
    OpenAPC

    OpenAPC

    An open process control and laser engraving software solution

    An extensive and multi-platform visualisation, process control and HMI application that supports many different devices via an open plug-in interface. Beside a visual GUI editor a debugger is part of the package.
    Downloads: 2 This Week
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  • 21
    AMBIT:Chemical Structure DB&Web Service

    AMBIT:Chemical Structure DB&Web Service

    Chemical structures database & machine learning with web services API

    AMBIT offers a cheminformatics data management for chemical substances, structures and nanomaterials. Flexible structure, similarity and study queries storage, descriptor calculation and predictive models building via REST web services.User interface for creating read across assessment and generating reports, aligned with regulatory and industrial requirements. Command line applications also available. Integration with third party tools and databases.
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    Downloads: 2 This Week
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  • 22

    Free Parsers for Liberty UPF SDC VCD

    Free Liberty, UPF, SDC and VCD Parsers with Python, Java and Tcl APIs

    Downloads: 0 This Week
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  • 23

    detectproj

    Automated detection of the unknown early map projection

    New scientific software supporting the automated detection of the early map projection and its parameters. Useful for studying and analysis of different kinds of maps with the lack of information about the map projection. The analysis is based on the minimization of residuals between control points on the early and current reference maps. Designed for cartographers as well as for enthusiasts. Available free of charge. The awareness of the map projection is primarily important...
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  • 24
    SPELL

    SPELL

    Satellite Procedure Execution Language and Library

    SPELL is a framework composed of an integrated environment for the development and execution of satellite automated procedures. It is capable of running any procedure via different Ground Control System and for any spacecraft. The goal of SPELL is to have a powerful and readable automation language, which can be shared across Satellite Operators and Satellite Manufacturers. If we all use the same language, the cost and the risk associated with automated procedures will go down! SPELL...
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  • 25

    multinotes

    Text architecture for music theory.

    The text structures of notes and publications in music theory and musical analysis bring challenging requirements: how to include music notation excerpts, graphics, and even combinations thereof, into the typeset flow of paragraphs and into the work-flow, and how to integrate navigable references to these and to single domain entities into running text. Furthermore, dynamic interactive documents can be useful for presenting complicated interdependencies to the reader more clearly, far...
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