Showing 4563 open source projects for "mchange-commons-java"

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  • 1

    CoVEC

    Consensus Variant Effect Classification

    The package provides SVM models to be used with SVMlight (http://svmlight.joachims.org/) for drawing a consensus out of individual 3rd-party predictions about the effect of mutations. The 3rd party tools are SIFT, Polyphen2, SNPs&GO and Mutation Assessor. The package also provides a series of Perl modules and scripts to assist in the preparation of data. The modules can be used to build custom tools and pipelines, whereas the scripts provide basic executable implementations based on the...
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  • 2
    RoboCup GameController is an open source software used in the RoboCup Humanoid League and the Standard Platform League. Referee commands are sent to the robots on the playing field via wireless network to reach a higher autonomy of the players.
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  • 3
    Sikulier is a UI automation framework. I does not need any programming language knowledge for automation.
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  • 4
    MyNook

    MyNook

    A machine learning system for supervised document classification

    An open source system for supervised document classification based on statistical machine learning techniques. On the contrary of the state of art classification techniques, MyNook just requires the title of the document, not the content itself.
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  • 5
    A lightweight and scalable genome browser
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  • 6
    The aim of the project is create a learning tools for students. If children become aware of consumption, perhaps they will be able to influence and affect a larger system of the school. Within smart energies, the goal of the monitoring system is the control and management, even remotely, ofconsumption and production of energy users are characterized by complex energy systems. Requires DOG - The DOG Operating Ground
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  • 7
    RODS (Real-time Outbreak and Disease Surveillance) is a real-time computer-based public health surveillance system initially developed at the RODS Laboratory, University of Pittsburgh for the early detection of disease outbreaks .
    Downloads: 2 This Week
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  • 8
    MADS
    MADS (Multipurpose Agricultural Data System) is a free open-source tool for modelling and analysis of agricultural activities - crops, livestock, forestry and others - in developing countries, at sector, regional or project level.
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  • 9
    The RoboCup MSL Refbox is used for helping the referee to control a robotic soccer game (used by RoboCup Midsize league).
    Downloads: 1 This Week
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  • 10
    sphereGL

    sphereGL

    Stroop test using OpenGL

    This is a java application using JMonkey API. The project has been completed using C++, however for this version it will use java to make it easier to use.The task involves letting the subject know that he must select a particular colored and shaped object. However, the instruction will be written in a different color than the requested selection.
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  • 11

    GenNon-h

    Simulating non-homogeneous multiple sequence alignments

    A number of software packages are available to generate DNA MSAs evolved under continuous-time Markov processes on phylogenetic trees. On the other hand, methods of simulating the DNA MSA directly from the transition matrices do not exist. Moreover, existing software restricts to the time-reversible models and it is not optimized to generate nonhomogeneous data (i.e. placing distinct substitution rates at different lineages). GenNon-H is the first package designed to generate multiple...
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  • 12
    The Java RTree project aims to maintain an Java version of the RTree spatial indexing algorithm. See http://jsi.sourceforge.net for more information, and http://github.com/aled/jsi for latest development code.
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    Downloads: 152 This Week
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  • 13
    Natural Risk Sensing
    Platform providing the support for Wireless Sensor Networks in the domain of Natural Hazards as a Service. The objective of the WSN platform is monitoring the behaviour of rockfall barriers, rockfall netting, rock sheds and other protection systems
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  • 14

    Homemotion

    Homemotion is a Java based control center for home automatation.

    Homemotion is a Java based application for home automation. It uses of an internal notification bus that is connecting different components. The usage of generic attributes and adapters allows to add (and mix) different hardware backends. The default UI interface is build using newest JavaFX technology and also includes a small JavaFX UI framework.
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  • 15

    JPacketGenerator

    UDP Packet Generator (Stream generator)

    ...Works with a packet receiver to control the network status as Bandwidth, RTT, jitter, Loss % etc etc... Set Source Address, Destination address - Port Packet Size Stream Bandwidth And press start Command Line interface available java -jar JPacketGenerator.jar srcAddress srcPort dstAddress dstPort bitRate_bps All parameters are mandatory and with parameters the generator require no GUI or windows manager to work. If The project will be useful I'll post some more detail or helps about the usage.
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  • 16
    Task of the project is a semantic annotation of Czech texts by using NLP tools.
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  • 17
    Software for multilingual content analysis
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  • 18
    Abandoned version of qbc. DOES NOT WORK properly
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  • 19

    SLiMScape

    A Protein Short Linear Motif Analysis Plugin for Cytoscape

    SLiMScape adds Short linear motif discovery tools to Cytoscape, transforming it into a SLiM discovery platform. A tutorial is available at the following URL: http://bioware.ucd.ie/slimscape/
    Downloads: 0 This Week
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  • 20
    ADOPS

    ADOPS

    Automatic Detection Of Positively Selected Sites

    ADOPS is a bioinformatics tool that automatizes the detection of positively selected sites given a set of unaligned nucleotide sequence data. ADOPS implements a complete workflow that integrates three well-known bioinformatic tools: T-Coffee, MrBayes and Codeml (PAML).
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  • 21

    OMR Reader

    OMR Sheets Data Retrieval Software

    OMR Reader is an application to read data from scanned images of OMR sheets. You can first create a template for a particular form and save it as a .omr file. To create a template, use a form with all filled marks. The program will automatically detect the marks. Now choose the marks for a group, and name the group. Do this for all the option groups on the form. Now save the info of these groups in a .omr file. For different forms, you can have different .omr files. These files can later be...
    Downloads: 5 This Week
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  • 22
    ns-2 Trace Toolkit

    ns-2 Trace Toolkit

    This toolkit allows you to analyze and validate ns-2 traces

    ns-2 Trace Toolkit was developed to help users to manage and debug ns-2 trace files. It is particularly useful for users that generate ns-2 trace files with other tools such as VanetMobiSim or SUMO (Simulation of Urban Mobility). With ns-2 Trace Toolkit, users can debug their trace files by generating histograms for: (1) node speed, (2) node x-position, and (3) node y-position. These histograms can give hits about concentration of nodes. Additionally, the tool allows users to simulate...
    Downloads: 0 This Week
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  • 23

    Information Retrieval Service Assessment

    IRSA is a toolkit for Information Retrieval Service Assessment.

    IRSA is a toolkit for Information Retrieval Service Assessment. It builds upon the Grails Web Framework and is developed at GESIS. It implements two main functionalities: (1) A number of showcases that show the implemented services like a so-called Search Term Recommender and different science-model based ranking mechanisms and (2) an IR assessment module that let's one do an interactive evaluation of the retrieval services. All implemented services are available via well-documented...
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  • 24

    Fylogenetica

    Constructing level-1-networks consistent with a set of quartets

    This project is an implementation of an algorithm by J. Keijsper and R. Pendavingh. The goal of the algorithm is to construct a phylogenetic level-1-network that is consistent with a given set of quartets.
    Downloads: 0 This Week
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  • 25
    CytoCopteR

    CytoCopteR

    A Cytoscape plug-in for training logic models, based on CellNOptR.

    Homepage: www.cellnopt.org Based on prior knowledge networks CellNOptR can derive functional information about the network using logic modeling. CytoCopteR is a friendly way to use CellNOptR taking advantage of the network visualization and analysis of Cytoscape and without requiring knowledge on R.
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