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Tool to convert Affy cel files to be Illumina Final Report compatible
cel2fr is a perl script that can be used to convert Affymetrix CEL files into a format matching an Illumina Final Report. The primary use of this tool is to work in concert with the CNV analysis tool CNVision (www.cnvision.org), but its use is ideal for meta-studies combining multiple datasets.
Current version is not yet functional.
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A Java-based mesoscopic, intermodal traffic simulator (MITS), providing a tool to evaluate scenarios (consisting of a road/rail/waterway network topology and load allocation) in terms of throughput, average speeds/travel times, congestion prediction.
LaboLIM is a laboratory information system aimed at microbiology laboratories. It is licensed under the GPL V3.0. It is written in PHP and currently uses SQLite 2.1, but could be converted to MySQL.
It was partially developed with a working micro lab.
Looking for some people to chip in and make it a nice project.
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This browser-based tool is a flexible solution for documenting both logical and physical database schema designs. It supports simple version tracking concepts to document schema changes in varying stages of planning and implementation.
Ciclope Planetarium is a web-based planetarium that provides a simulation of the sky from any location at any time and date. Developed using Google Maps API & AJAX. Available in PHP & J2EE. Integrated in the Ciclope Stars project (www.ciclope.info/stars)
jASCOMPure is Java implementation of ASCOM framework (and later drivers). Everything is in Java, so it is usable on most of operating systems (with used rxtx API ported).Applications can access drivers directly (java) or through embeded JSP pages.
PartiGene is a pipeline tool for the analysis of expressed sequence tag datasets. It integrates sequence base calling, sequence clustering, consensus building, and annotation, and delivers a relational database accessible through a web interface.
fedg extracts knowledge and relevant events in chinese texts to generate Feature Event Dependency Graph.FEDG is a knowledge representation model,meaningful for latent knowledge discovery and efficient reasoning.
Trading Agent Competition (TAC) is an international forum designed to promote and encourage high quality research into the trading agent problem.
The TAC SCM open-source software consists of a Java-based Game Server and and library for developing agents.
A small Program to simulate simple Robots with Atmel AVR Microcontrollers (others follow after the first beta). The environment will be first similar to the competitions on http://www.robotchallenge.at. It's written in QT4.
CTM, an acronym for Closure Task Manager, is a generic Web based project management system used to manage tasks and the project team for one or more genome finishing (Closure) projects.
The GIEWS Workstation is a web-based GIS mapping tool for managing national food security and early warning data. It aims at standardizing food security information to facilitate exchange at both the national and international levels.
reputron is a knowledge extraction engine platform that covers all aspect of text mining, relevance, indexing and querying on a corpus of text documents.
Diesel Linux is the brain child from me coming up with me method to automate a WVO purification and Utility power co-generation project.
While at this time it will not be Officially patented, but it will be protected by poor man's copyright.