Search Results for "sql command line" - Page 43
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Showing 2376 open source projects for "sql command line"
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The ASN.1 Compiler
Go to github.com/vlm/asn1c for the latest version.
This ASN.1 compiler turns ASN.1 specifications into C code. The asn1c is shipped together with conformant BER/DER/XER/PER codecs. The X.509, GSM TAP3, MEGACO, RRC and LDAP encoding and decoding examples are part of the source code distribution. NOTE: THE asn1c PROJECT HAS LARGELY MOVED TO GITHUB: http://github.com/vlm/asn1c -
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BreakDancer-0.0.1 is a Perl package that provides genome-wide detection of structural variants from next generation paired-end sequencing reads.
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Various tools for creating annotated parallel corpora including pre-trained tagging and parsing models for various languages, sentence alignment tools and word alignment tools. Uplug also includes a web-based interface for interactive sentence and word alignment and scripts for indexing and querying parallel corpora using the Corpus Work Bench CWB. Download 'uplug-main' first and then add other packages.
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GenoTan identifies inherited variation of microsatellite loci from short sequence reads using a discretized Gaussian mixture model combined with a rules-based approach.
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NaRIBaS
Unix-based preparation and analysis toolbox for molecular simulations
Unix-based preparation and analysis toolbox for Nanomaterials and Room Temperature Ionic Liquids in Bulk and Slab using bash scripts, Gromacs tools and Matlab functions. NaRIBaS provides a framework that decouples user input parameter and terminal based command lines. NaRIBaS does not replace a simulation software and specific analysis tools like Gromacs, but it allows iterative repetition of tasks while changing specific input parameter. The toolbox is to be understood as a scripting... -
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UM-OLSR is an OLSR (Optimized Link State Routing protocol) implementation for the ns2 network simulator.
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IRIS is an extensible reasoning engine for Datalog extended with function symbols, unsafe rules, negation, locally stratified or non-stratified programs, XML schema data types and a comprehensive and extensible set of built-in predicates.
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1/ WCA interprets a file containing the definitions of variables and expressions to be analysed, computes the worst case analysis, and prints the results. 2/ WCADB extends MathCAD to perform Monte-Carlo W.C.A. based on drifts taken from an external database.
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GEPETTO - Gene Prioritization in Java
GEPETTO (GEne Prioritization ExTended TOol)
GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein... -
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Command line / filter tool - Analyze, compute and transform numerical data tables of unlimited length
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WTMParse
Python script to parse Unix-like WTMP files
Python script that was originally intended for use in forensic examinations that parses WTMP files from Unix-like operating systems and generates a CSS-styled HTML report containing login terminal, username, log start date and login time/date in a table. Good for postmortem forensic examinations or as a way of getting "last" like information where you don't have the ability to boot the machine in question but can grab the wtmp. -
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Circonspect is a bioinformatic tool to produce contig spectra, useful for the estimating viral diversity in metagenomes. It uses an external assembly program and a bootstrap technique to automate the generation of contig spectra and cross-contig spectra.
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lpg_ptbr
The Linux Programmer's Guide em pt_BR
The Linux Programmer's Guide em português do Brasil -
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SPiM2Eclipse
Eclipse plugin for Stochastic Pi Machine
...A web application Visual SPiM, and a destkop application SPiM Player. Both simulation tools require to be run on a Windows platform. Fortunately Microsoft has also released a command line version for Linux and Mac OS based on OCAML however this version will only output a CSV file for the simulation results. SPiM2Eclipse provides a bridge for those running SPiM from the command-line by allowing simulations to be completed by a single click, displaying an embedded plot of the results. Features: -As an Eclipse plugin you have all of the powerful features of Eclipse available to you. ... -
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PolyBoRi is implemented as a C++ library for Polynomials over Boolean Rings, which provides high-level data types for Boolean polynomials. A python-interface yields extensible algorithms for computing Groebner bases over Boolean Rings.
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MID Adjust
Prepare reads with no MIDs or variable length MIDs for analysis
Prepare reads for Pyrotagger or QIIME analysis Pyrotagger only accepts sequencing reads that have MID sequences (a.k.a barcodes, tags), and all of them must have the same length. When you have no MIDs, or variable-length MIDs, MID Adjust appends new MIDs or extends existing ones to satisfy Pyrotagger requirements. New features include the ability to generate fake quality scores and to parse and generate QIIME mapping files. -
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Storyteller
TAL effectors DNA-binding site predictions
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MCC-LIDAR
Multiscale Curvature Classification for LIDAR Data
MCC-LIDAR is a C++ application for processing LiDAR data in forested environments. It classifies data points as ground or non-ground using the Multiscale Curvature Classification algorithm. -
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dmmutils
Linux and Windows utillity for Agilent U1230, U1240 and U1270 DMM
Command line utility for Agilent U1230, U1240 ans U1270 series digital multimeters (DMM). Both Linux and Windows are supported. So far only tested on U1252A, but the utillity do probably work with all the the following multimeters: Agilent U1231A, U1232A, U1233A, U1241A, U1242A, U1241B, U1242B, U1251A, U1252A, U1253A, U1251B, U1252B, U1253B, U1271A, U1272A, U1273A. -
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Matlab tool for plotting multi-channel biomedical signals. It is designed for researchers on both engineering and medicine who have to collaborate to visualize and analyze signals. It is the ideal tool to plot electroencephalogram (EEG), Foetal Heart Rate (FHR) and many other signals with the standard tools used in clinical routine.
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A tool to identify genomic structural variations from paired-end and mate-pair sequencing data
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android-python2.7.3
Python2.7.3 for android
This is python2.7.3 which can be compiled using android-ndk By using python ,Its is possible to run lot of great application in android phone. At the time of writing I could run IPython, Isympy, Django etc on my android phone. This project only considering command-line binary builds. Not any GUI apps. -
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SEG-Y files need special compression because they don't compress well using gzip and the like. The code is cross-platform C++ using nothing else than standard system libraries. This is a spin-off from the OpendTect project (http://opendtect.org).
