Search Results for "throughput" - Page 4
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Showing 85 open source projects for "throughput"
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The High Throughput Sequence Analysis Pipeline uses freely available bioinformatics tools from NCBI, Phylip, EMBOSS and clustalw to identify and group closely related DNA samples. It can be run on *Nix systems linearly or in parallel using the SGE.
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FACT
Annotate & interpret your high-throughput experiment
The Functional Annotation and Correlation Tool allows the meta-analysis of data from high-throughput experiments (typically microarrays) by annotating (clones, genes, GeneOntology, location, etc.) and correlating data sets to identify important patterns. -
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Open Screening Environment is a open source system for management of High Throughput Screening related experiments. The platform consists of new research tools that will enhance significantly management and analysis of HTS data. More information can be f
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XAS is a software with graphical user interface to performan analysis of data generated by a high-throughput expression cloning technology using gene expression microarrays.
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ORFer reads the NCBI GenBank XML sequence format and extracts open reading frames for proteins. Sequences can be requested by GI or accession number. ORFprimer is an extended software package for high throughput PCR primer design for biological sequences
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Project MOVED to Codehaus New location is http://esper.codehaus.org The Esper project aims to provide a general-purpose event processing facility in Java for complex event processing of real-time, high throughput data streams.
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Io (ISREC ontologizer) is a program to classify high-throughput genomics data (e.g. microarray results) in the Gene Ontology. Io includes a statistical estimation of the significance of data in the GO nodes and reannotation files for Affymetrix chips.
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Thea, Tools for High-throughput Experiment Analysis, is an integrated information processing system dedicated to the annotation of data issued from classification systems with biological information coming from a knowledge base.
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PACLIMS (Phenotype Assay and Characterization Laboratory Information Management System) is a web-based, open source software system for tracking and data capture from high throughput mutational screens. Click on the Home Page Link above for test DB
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A Java-based mesoscopic, intermodal traffic simulator (MITS), providing a tool to evaluate scenarios (consisting of a road/rail/waterway network topology and load allocation) in terms of throughput, average speeds/travel times, congestion prediction.
