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FVS is a cross-platform 2-D image and 3-D object analysis library. It is intented for use within content-based retrieval systems to facilitate retrieval of "similar" images or objects to a given query image or object.
BioStream enables bioinformatics researchers to create, query and apply tools to their own databases. It supports sequence files and other data types by allowing the creation of metadata definition files.
reportmaker allows you to define a generic report in xml containing sections,graphs,tables,images.
The data can be retrieved directly with sql query.
The report can be exported in various formats (html,xml,rtf,pdf)
Mainly a browser for medical patients documents. For now, it works for displaying radiology images in DICOM format. It supports Query/Retrieve.
Build on Python, wxPython and ZODB.
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The LEO-SYSGEN project deals with development of the Sysgen tool for Linux Based ECOS interface for OSEK/VDX Based RTOS. Feel free to download-develop-submit and query about it!!!
BioPostgres is a collection of modules that extend PostgreSQL for applications in Computational Biology. These modules implement new datatypes with query operators and other tools for large-scale query and analysis.
Web-based AJAX tool for creating diagrams of icons and links between them. Features include Google Maps & Google Earth integration, configurable tool palettes, and automated palette generation from a Google Local query.
TreeSap introduces simple yet powerful qualitative querying:rather than specifying a query using numerical measurements ("within 5km") english phrases are used ("near"). In-built fuzzy logic handles vagueness producing results with weighted relevance
DNAID software is a tool for assessing confidence in biological identifications made by comparing DNA sequences. It allows DNA sequences to be placed within a taxonomy and determines confidence in matches of a query sequence to each taxon.
Framework for Query Expansion for Apache Lucene. Provides implementation of Rocchio Query Expansion (QE) method. Provides implementation of pseudo feedback QE utilizing Google's web API to query the world wide web in order to acquire terms for QE.
TSE is a test bed for a web service approach to federating taxonomic name databases. Put in English, it takes your query and talks to a number of different databases, asking each one whether they contain that name.
Read single-band NASA PDS (Planetary Data System) Image files in Python. Query header information and extract binary image data in a format suitable for PIL (Python Imaging Library). Works for Pathfinder and Mars Exploration Rover images, maybe others.
VWSphp is a weather portal for users of the Virtual Weather Station by AmbientWeather. It gives owners of the VWS software the ability to build a weather website, using PHP, that allows users to view and query current and historical weather data.
JavaMatch is an engine that can search inside a runtime Java data structures, and look for objects that best match the criteria that you specify. The extensive query mechanism allows for highly customizable tuning of your match queries.
A Python interface to the Wordnet database of word meanings and lexical relationships. allows the user to type expressions such as N['dog'], hyponyms(N['dog'][0]), and closure(ADJ['red'], SYNONYM) to query the database for lexical relationships.
quaneko is a tool that allows you to quickly search for keywords in files on the harddisk. It creates indexes over all files in given directories. A typical search query takes only seconds. Support for various file formats can be easily configured.
Decodify is a simple program that parses a numerical string and extracts different parts of it as per user query. The main application of 'decodify' is to extract parts of a control bus in logic simulation, but many other uses are possible.
BioQuery is a bioinformatics tool that acts as a query builder for genetic, protein, publication, and other biomedical databases. BioQuery is also an update service that periodically resubmits saved searches and sends you new data as it is found.
A portable application for JavaME/MIDP-enabled devices (including most mobile phones) that enables you to browse an XML database of geocache information—in particular, the Pocket Query data generated by the geocaching.com web site—wherever you go.
Danaides stores meta-data from biological banks in a graph databases as well as OBO formatted ontologies.
It also provides a web query interface to parse ontologies or extract nodes based on ontology requirements.
Example: Get all known elements that are in family of Fish (species ontology) AND a RNA (sequence ontology).