Search Results for "python source" - Page 39
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Showing 1981 open source projects for "python source"
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QUASR
Cross-platform NGS processing and analysis pipeline in Python
QUASR is a lightweight pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is... -
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Mizar
N-body gravitational simulator
Mizar is an N-body gravitational simulator. Given a starting setup consisting of the masses, positions, and velocities of any number of objects (conceptually, planets and stars), Mizar calculates and draws how they subsequently move according to their velocities and the influence of each other's gravity. Requirements: * KDE 4.4.5 * Qt 4.6.2 Requirements to build: * KDE 4.4.5 dev files (e.g., provided by kdelibs5-dev in Ubuntu 10.04) * Qt 4.6.2 dev files (e.g., libqt4-dev on Ubuntu... -
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HMMLab
A Hidden Markov Model editor with support to HTK
HMMLab is a Hidden Markov Model editor oriented on HMMs for speach recognition. It can create, edit, train and visualize HMMs. HMMLab supports loading/saving HMMs from/to HTK files. -
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PROJECT MOVED: see http://www.vmtk.org for up-to-date information. Libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis in image-based blood vessel modeling.
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jLab est une plate-forme scientifique destinée à être l'outil de travail privilégié des étudiants, enseignants, ingénieurs, scientifiques et chercheurs. jLab est totalement modulaire et facilement extensible via un système de modules
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Compilation of Physics Calculators
A compliation of Physics derived claculators
A NEW GUI VERSION WILL BE RELEASED SOON! Thank you for visiting the Physics Calculator, provided by PIezoSystems Inc., please visit their company website at https://piezosystems.org. For other downloads, please visit our github page, https://github.com/PiezoSystems. We hope that you find this program useful and easy to use, for troubleshooting, please email us, contact@piezosystems.org. If any bugs were found, please email us at bugs@piezosystems.org. -
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Otto's Workshop
Geomatics & mapping tools for the masses!
The purpose of this workshop is to share the tools created as an aid to our everyday work with students, enthusiasts and specialists interested in the development and use of new technologies including (but not limited to) geomatics, mapping, web mapping services (WMS), drafting, remote sensing, GIS and related occult sciences of Gaia. Check out the NBR (dn2nbr) and NDVI (dn2ndvi) calculating tools for GRASS GIS at the top menu!!! -
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Application for geocaching or waymarking that allows you to import GPX or LOC files for editing. You can print out cheat sheets to take on the trail, export to KML or HTML, and send the data to your handheld GPS unit.
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PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.
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Dedalo
dedalo is a 2d cad drawing software written in python3.
dedalo is a 2d cad drawing software written in python3. It is licensed under the GPLv3. Dedalo features: layers, snaps (endpoint, intersection, midpoint), line, polyline, rectangle, delete, polygon, rectangle, arc, circle, points, text, spline, freehand drawing. Move, scale, rotate, offset, cut, extend, hatch, dimension, copy. English, italian languages SVG read-write. Not all features all fully supported. For more information a user manual is provided(pdf format, italian). -
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Atlas2Cloud
Atlas2 Genome Analysis Pipeline on Amazon Web Services
This is the backend source code of the Atlas2-Cloud pipeline on Amazon which starts and terminates worker nodes, runs analysis and monitors worker instances. It is PRIMARILY meant to be used through Amazon Web Services (AWS) management console by looking for the public Atlas2-Cloud machine image. Alternatively, the code can also be used for running the pipeline from your computer. By installing this software on your computer you will be setting up your computer to act as the head node... -
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Lightning Planning Framework for ROS
ROS package implementing the Lightning Framework using OMPL
LightningROS is a ROS package implementing the Lightning Path Planning Framework. The code here was developed for ROS Feurte. For later ROS versions, see https://github.com/WPI-ARC/lightning_ros This approach uses a path library to store previous experience while allowing generality by also planning from scratch. Please see the paper below for more details: A Robot Path Planning Framework that Learns from Experience Dmitry Berenson, Pieter Abbeel, and Ken Goldberg IEEE... -
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Injection Wizard is an application for injecting traffic into WEP protected Wi-Fi networks, like aireplay-ng, but it's much more easy to use and it can work with worse conditions.
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Python FFTW as the name suggests are Python bindings to the FFTW3 C-library from http://www.fftw.org. They use numpy and python ctypes, and often offer about twice the performance compared to the fft routines included in numpy.
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QDC (quick direct-method controlled) is an optimized exact implementation of the Gillespie's direct-method. It is designed for biochemical simulations when there is the need of dynamic parameters whose values can change during the simulation.
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3D tracking using wiimote
3D tracking of 4 IR LEDs using 2 wiimotes and python
This project is a part of a mini project required by the Mechatronics-2 course for the 4th year Mechatronics class in faculty of engineering Ainshams university. The mini project involves the control of an articulated robotic arm which resembles a human arm. The control is done via tele-manipulation which is done by the tracking of 4 IR LEDs fixed at the joints of the controller arm. This code is the part of the project responsible for the interfacing with the wiimote, stereo-triangulation... -
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pygolem
Python API for the GOLEM Tokamak discharge database
This simple Python API aims to provide a simple and easy to understand access to the discharge database of the GOLEM Tokamak. The scipy, numpy and matplotlib Python libraries are used for data analysis and plotting. -
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pycsw is an OGC CSW server implementation written in Python.
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Open Bayes is a python free/open library that allows users to easily create a bayesian network and perform inference/learning on it. It is mainly inspired from the Bayes Net Toolbox (BNT) but uses python as a base language. www.openbayes.org
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NLOPredict is a nonlinear optical prediction and data analysis tool. Nonlinear optical measurements can yield information about the structure of crystals, and orientation of molecules at surfaces and interfaces.
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This unit conversion program is based on the latest standard of International System of Units (SI) and NIST Special Publication 811 (1995 Edition) and provides many more conversions. Licensed under GPL3. Written in Python and Qt toolkit.
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wt210tocsv
Converts Yokogawa WT210 output to easily chartable CSV format
The Yokogawa WT210 outputs a CSV file through its GPIB-USB interface. The CSV is not easily chartable in Excel/Libreoffice. This will parse the CSV in a way that makes it more easily charted. -
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ptumon2csv
Converts output from Intel's ptumon utility into CSV format
Intel's PTU utility is for stressing a system's CPU and RAM. Along with PTU, an executable named ptumon will output sensor data at a rate of once per second. This data runs together and in order to be charted needs to be parsed. This tool works with the PTU tool for the Romley platform. -
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mlpy
Machine Learning Python
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL. mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3. mlpy is available both for Python >=2.6 and Python 3.X.
