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C++ and Python based open source graph visualization and analysis software, primarily intended for use in the analysis of social networks (other applications are also conceivable).
Manuelito is a Java tool for decrypting posttranslational modification (PTM) patterns of proteins based on MALDI mass spectrometry spectra. It was built for analysing the 'histone code' but it can be applied to any other highly modified protein.
EMT is an application to draw and test turing machines intended to help Formal Languages and Automata students to understand how turing machines work and test their own turing machines.
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Pulga is a program for numerical simulation of dynamical systems designed to provide students and researchers an easy way to model and qualitatively analyse their systems on a computer without the difficulty of traditional computer programming languages.
Avian Freeware Suite (AFS) provides two things: Developers with libraries for Java Swing Widgets, XML handling, Fortran95 and Pascal; End users (Medical students, doctors, scientists) with productivity tools they can use (quizzes, XML databasing & PDF)
This if calculator for complex numbers. It works with algebraic and trigonometrical form and has multiple memory slots. There are many mathematical functions like sin, cos and etc.
A very basic, very simple Java based GPS tool. Reads NMEA from GPS device over serial port - and does a few usefull things with it. The goal is to have something that can run and be useful on a desktop, laptop and handheld device.
BioMa is a specimen based Biodiversity database Manager. It is designed to store, organize, and manipulate biodiversity-related scientific data, either for the purposes of museums, scientific collections, or research projects.
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Trip Tracker is a position tracking client-server system. A real time tracking environment can be set up with a GPS receiver and a tracking server. The map client can show the map position of the GPS client in real time.
jFAST is a simple finite automata (FA) graphical simulation utility; it is designed to feature simple mechanisms for creating, editing, and simulating FA. jFAST is ideal for use by students, instructors, and self-guided explorers alike.
MiniRail is a Java/Swing-based application for the planning of model railway systems. It integrates an extensible railway-piece library, automated end-fitting, railway reports and much more in an easy-to-use,zoomable,flexible track planner user interface.
Clay3D is a complete, extensible, and feature rich suite of network agnostic, scalable applications for the production of computer generated imagery and visual effects. Please see homepage for more information.
The official repository of JCSim is now hosted by github at https://github.com/almejo/jcsim
JCSim is a fully functional Digital Circuit simulator written in Java. You can create and simulate simple (and not so simple) circuits in an easy way.
It includes a basic set of gates, simple creation of new gates and simulation.
PileWorks provides the organizational structure for coordinating several different projects which approach some aspect of Pile Technology. PileWorks defines a set of interfaces and implements some basic infrastructure for Pile engines and agents.
"Open SysAME" stands for Open-source Systems Analysis and Modeling Engine. Using the concepts developed by Dr. John Warfield (Interactive Management) and George Chandy (OPMS), Open SysAME facilitates collaborative modeling and analysis of systems.
A tool for decoding and presenting Geotechnical Sounding data (such as CPTu). Formats supported are the SGF standard as defined by the Swedish Geotechnical Society (www.sgf.net), and used by a number of commercial products, aswell as Generic text
Microarray Explorer (MAExplorer) is a Java microarray data-mining bioinformatics program.
It includes data management, graphics, statistics, clustering, reports, gene data-filtering, user
written MAEPlugins, documentation, tutorials, demo data.
The target of JCustomizer project is the generic and persistent customization of every Java Swing/AWT GUI at runtime: fonts, colors, texts, accelerators, ... A nice accompaniment is a WYSIWYG access to internationalization without programming efforts.
OpenAOS is a open source project of a platform independent and distributed service for accessing measurement data over a standarisized interface (ASAM ODS) defined by ASAM e.V. (for details please visit standards at www.asam.net).
gpx2map is a tool that renders GPS data in the form of way-points, tracks and routes from GPS exchange (GPX) XML documents as Portable Pixmap (PPM) images on a background of map tiles.
GPS (NMEA 0183) extensible communication library written in Java. Handles standard GLL, GGA, RMC, GSA and GSV sentences and may be extended on application-level for handling any other sentence types. Bundle also contains GUI- and console-based GPS tool.
Mens is a collection of simple, easy to use menstruation calendars for a number of platforms. So far, there is one for mobile devices like PDAs and cell phones that can run Java programs.