Showing 4339 open source projects for "java"

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  • 1
    gattMath is a educational math (graphical) program that show some concepts behind Integral and Differential Calculus, like Riemann, Simpson, Darboux, Trapezoid, Monte-Carlo integration, derivative, antiderivative, tangent,..., and sure a plotter.
    Downloads: 0 This Week
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  • 2
    Wrapper for vendors to simplify usage of the Java Speech API (JSR 113). Note that the spec is an untested early access and that there may be changes in the API.
    Downloads: 0 This Week
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  • 3
    Biogenesis X Mod

    Biogenesis X Mod

    Mod of the evolution simulation and artificial life program Biogenesis

    This project is a modification of the original evolution simulation & artificial life project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ In both, the original project and this modification, 2-dimensional organisms consisting of line segments interact with each other, reproduce and evolve in time. Compared to the original project, this modification explores the following features: * alternative mutation mechanisms * an alternative stress-based aging...
    Downloads: 0 This Week
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  • 4
    Gecko Hamaker

    Gecko Hamaker

    Calculates Hamaker coefficient,interaction free energy,force,torque.

    The Gecko Hamaker open-source software project is a full implementation of the fully retarded Lifshitz formulations for isotropic and anisotropic plane-plane and cylinder-cylinder interactions with intervening interlayer materials, planar systems of up to 99 layers, and graded interfaces for the modeling of grain boundaries or other continuously changing systems, accompanied by a database of material optical properties spectra. The machine-readable optical property database is available...
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  • 5

    SoNIA (Social Network Image Animator)

    Social Network Image Animator creates animations of network data

    SoNIA (Social Network Image Animator) is a Java-based package for visualizing dynamic or longitudinal network data and rendering it out as animations. The home page with examples is located at http://sonia.stanford.edu Documentation is at https://sourceforge.net/p/sonia/wiki/Main_Page/
    Downloads: 0 This Week
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  • 6
    DCTFinder

    DCTFinder

    Extract title and creation time from web page.

    Web pages do not offer reliable metadata concerning their creation date and time. However, getting the document creation time is a necessary step for allowing to apply temporal normalization systems to web pages. DCTFinder is a system that parses a web page and extracts from its content the title and the creation date of this web page. DCTFinder combines heuristic title detection, supervised learning with Conditional Random Fields (CRFs) for document date extraction, and rule-based creation...
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  • 7
    Observation Manager
    Java based astronomical logging software which stores it's data in a free and open XML based format (OpenAstronomyLog). Discontinued project: Please check out the fork: https://github.com/capape/observation-manager for an updated version
    Downloads: 2 This Week
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  • 8
    A version aware Java API to Ensembl data systems.
    Downloads: 0 This Week
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  • 9
    Java class libraries for structural biology development: includes protein format conversion tool, printf-based text formatting, Pred2ary secondary structure prediction, neural net library, Hooke-Jeeves global optimizer, and misc. math & statistics.
    Downloads: 0 This Week
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  • 10

    libVMR

    VMR - machine learning library

    libVMR is a class library written in Java which implements code generator for group method of data handling - GMDH. The library is intended for users, with machine learning skills. libVMR provides an effective framework for the research and development of data mining and predictive analytics. libVMR is based on the most popular neural network model with a higher generalization ability from kernel tricks - vector machine by Reshetov (VMR).
    Downloads: 0 This Week
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  • 11
    Java Oriented Matroids
    This is a Java library for manipulating Oriented Matroids.
    Downloads: 0 This Week
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  • 12
    MolTPC

    MolTPC

    MolTPC provides a solution for fully automatic tautomer enumeration.

    Besides all their conformational degrees of freedom, drug-like molecules and natural products often also undergo tautomeric interconversions. Compared to the huge efforts made in experimental investigation of tautomerism, open and free algorithmic solutions for prototropic tautomer generation are surprisingly rare. The few freely available software packages limit their output to a subset of the possible configurational space by sometimes unwanted prior assumptions and complete neglection of...
    Downloads: 0 This Week
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  • 13
    JFCM
    Java implementation of Fuzzy Cognitive Maps (FCM). Implementation aims to be: small (and fast), simple to use, flexible enough to be used as a basis for other projects / libraries.
    Downloads: 0 This Week
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  • 14

    BioExtrac

    Support scientific/logistic process to extract samples from a biobank

    This application supports the two process scientific and logistic . - register the demand for an analysis - register the targets, load in the database - obtain the best list of samples for those targets (the search can be made with different parameters) - be able to do it again till the list is not satisfied the statistician ( in term of analysis power ... ) - made the list in an excel spreadsheet - upload the list of the picked samples and upload the database - made the list...
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  • 15

    DDrive

    Simulador de discos HDDs e SSDs

    Este software é um simulador de discos parametrizáveis em cenários configuráveis com a capacidade de receber extensões de modos de geração de rajadas, escalonadores e analisadores.
    Downloads: 0 This Week
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  • 16

    cnvCapSeq

    detecting & genotyping CNV in long-range targeted resequencing.

    cvnCapSeq is a set of Java-based command-line tools for detecting and genotyping copy number variation (CNV) in targeted resequencing experiments of large contiguous genomic regions.
    Downloads: 0 This Week
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  • 17
    medintux

    medintux

    Gestion de Cabinet Medical / Medical Patient Record

    Since 2 months, new version will arrive in QT5, with better integration of multimedia document and multilanguage support. If you have some specificity in your country, tell us we can integrate it. Medintux est une suite logicielle pour la gestion du cabinet médical et des services hospitaliers. Agrément ROSP, Compatible HAS avec le Vidal ou Thériaque, CIM10, codage CCAM. Liaison Sesam Vitale, Hprim, Apicrypt, Sigems. 100% Paramétrable et personnalisable. Environnement : Fonctionne sous...
    Downloads: 113 This Week
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  • 18
    This is a project which aims to create a theorical model for trajectories of airsoft bb's, and to compute them.
    Downloads: 0 This Week
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  • 19
    Libraries, documentation, examples & drivers for Eagle Technology South Africa's Data Acquisition products. These include ISA, PCI, PCI Express, USB, Serial & Ethernet. Supported languages will be C/C++, JAVA, Perl, Python.
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  • 20

    TUIT

    Taxonomic Unit Identification Tool

    For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/ IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve out of the box compatability with tools, that assume RDP-formatted input. A new field has been added to the properties.xml, please make sure to update it to contain <OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section. Read our paper in Biotechniques:...
    Downloads: 0 This Week
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  • 21
    qPMerge

    qPMerge

    phospho-peptide merge tools for Galaxy

    Downloads: 0 This Week
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  • 22

    cnvOffSeq

    detecting & genotyping intergenic CNVs using off-target exome data

    cnvOffSeq is a set of Java-based command-line tools for detecting and genotyping intergenic copy number variation (CNV) using off-target data from whole-exome sequencing experiments.
    Downloads: 0 This Week
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  • 23
    ALTER is a web-based tool to transform between multiple sequence alignment formats. ALTER focuses on the specifications of mainstream alignment and analysis programs rather than on the conversion among more or less specific formats.
    Downloads: 1 This Week
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  • 24
    Cardiac Atlas Project
    The aim of the cardiac atlas project is to establish a structural and functional atlas of the heart. This project is funded by the NIH grant and led by the University of Auckland, New Zealand.
    Downloads: 0 This Week
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  • 25

    Belief Merger

    A simple Belief Merging Prototype

    Belief merging aims at combining several pieces of (possibly inconsistent) information coming from different sources. The goal is to produce a single consistent set of information, trying to keep the most of the information of the sources. A belief merging operator is the responsible for making the belief merging. With this tool you can compare the ΔΣ, ΔGMax and the Δps (PS-Merge) operators.
    Downloads: 0 This Week
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