Showing 1981 open source projects for "python source"

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  • 1

    hrefinder

    Detection of homologous recombination events from SNP data

    This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of...
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  • 2
    Physical modelling of water transport in plants
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  • 3
    RSAT

    RSAT

    A script to perform SAT attacks on RSA

    SAT solvers are being used more and more in partial key exposure attacks. The scope of this script is to show that SAT solvers can be used in partial key exposure attacks of RSA with very good results.
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  • 4

    PyRoboSim2D

    Python+Pygame robot simulator 2D

    2D robotic simulator in Python 2.x, tested in 2.6 and 2.7, under Win7(64) and Ubuntu 10.04 (Lucid). Needs the matching version of Pygame installed! (www.pygame.org) Download the .py file and two .bmp files: -->back2_800_600 for background -->any of the robo1.bmp through robo4.bmp for robot image (different colors). The map of the "room" can be changed by modifying the list of obstacles. Read more in ReadMe.txt and in the .py file comments.
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  • 5
    Command line utility to create graphs and plots for web, CGI, paper, slides. Create pie charts, bar graphs, scatterplots, and other kinds of graphic displays from your alphanumeric, date, time, or categorical data. Input data is in .csv or .txt. Output graphics in gif, postscript, eps, png, svg and others. Useful in dynamic web content systems and other unattended uses. Command line, batch mode. For full details see http://ploticus.sourceforge.net Dec 2016: A new compact python API...
    Downloads: 3 This Week
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  • 6
    LibCPIXE is a library for simulation of Particle Induced X-ray emission spectra.
    Downloads: 0 This Week
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  • 7
    IMPORTANT: The project moved over to github! You can find it at: https://github.com/exhuma/python-cluster
    Downloads: 0 This Week
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  • 8
    MyNook

    MyNook

    A machine learning system for supervised document classification

    An open source system for supervised document classification based on statistical machine learning techniques. On the contrary of the state of art classification techniques, MyNook just requires the title of the document, not the content itself.
    Downloads: 0 This Week
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  • 9
    A simple python script for aquarists that figures tank volume, salinity, converts temp & volume, and calculates substrates based on their specific gravity.
    Downloads: 0 This Week
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  • 10
    Cern Root debs for Ubuntu/64 and 32bits
    FOR DETAILED INFORMATION GO TO http://cernrootdebs.sourceforge.net Packages of Cern Root software for Ubuntu/64/32bits. This package is going to be installed on /usr/local. Enabled: minuit2 roofit unuran tmva from 5.34.01 Enabled support for asimage, astiff, builtin_afterimage, builtin_lzma, cintex, explicitlink, fftw3, fitsio, gviz, genvector, krb5, ldap, mathmore, memstat, minuit2, mysql, opengl, python, reflex, roofit, shadowpw, shared, ssl, tmva, unuran, x11, xft, xml.
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  • 11
    The goal of the NHI1 project is to create an artificial (non human) intelligence until 2040. The core is available for C, C++, C#, JAVA, Perl, PHP, Python, Ruby, Tcl and VB.NET.
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  • 12
    ddsweet is collection of tools and routines for science calculation and simulation.
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  • 13

    eemod_dnsmod

    A detailed nitrogen model inside of a simple ecological model

    This is an simple ecological model for lakes and reservoirs that contains a very detailed description of the most relevant nitrogen processes. The model is not very complete, but the main intention is to develop a library to be coupled with other models and use the full-mixed model as a testing version. A lot of things can be improved. I will read all the suggestions but I cannot promise that I will include all of them. Every new part of the code will contain the name of the author. If...
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  • 14
    gbview
    is a interactive molecular visualisation program designed especially designed for coarse-grained simulation of non-spherical particles. Ellipsoids (Gay-Berne), disks, and custom shaped uniaxial particle (e.g. pear-shaped particles) can be represented.
    Downloads: 0 This Week
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  • 15
    sigrok
    The sigrok project aims at creating a portable, cross-platform, Free/Libre/Open-Source signal analysis software suite that supports various device types, such as logic analyzers, MSOs, oscilloscopes, multimeters, LCR meters, sound level meters, thermometers, anemometers, light meters, dataloggers, function generators, power supplies, GPIB interfaces, and more.
    Downloads: 2 This Week
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  • 16

    CudlaBot

    Quadruped robot with simulator control software

    Downloads: 0 This Week
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  • 17

    Dvipdfm tool for SCons

    SCons tool to cooperate with dvipdfm program

    SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This is a SCons extension (tool) which enables usage of the dvipdfm program to convert dvi files to pdf.
    Downloads: 0 This Week
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  • 18
    Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no
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  • 19
    PyMbs has moved to Bitbucket: https://bitbucket.org/pymbs/pymbs PyMbs is a Python library for modelling holonomic multibody systems. It is able to generate simulation code for Python, Modelica and Matlab.
    Downloads: 0 This Week
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  • 20

    GS junior Webserver

    GS junior Webserver

    GS junior Webserver is a web based file server to easily access sequencing data of
    Downloads: 0 This Week
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  • 21
    LEDs3

    LEDs3

    Calcula la resistencia para los LEDs

    Este pequeño programa calcula la resistencia que debe ir asociada a cada diodo led, también suministra algo de información adicional
    Downloads: 0 This Week
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  • 22
    A set of very optimized tools for indexing/querying huge genomes/files. Provided so far: a very fast exact mapper, and an unconstrained split-mapper
    Downloads: 2 This Week
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  • 23
    A small web application able to generate dynamic charts from data collected by our personal weather station ( like WH-1080 and others ).
    Downloads: 0 This Week
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  • 24
    PACS VM

    PACS VM

    ISO - Customized version of dcm4chee 2.17.3 for MySQL.

    1. Add JBoss Application Server 4.2.3.GA for JDK 6. 2. Cleanup for Windows and deprecated files. 3. Off CONSOLE records - http://forums.dcm4che.org/jiveforums/thread.jspa?messageID=4787
    Downloads: 0 This Week
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  • 25
    pyscaline

    pyscaline

    A simple calculator written in Python 3.3.0 and GTK+

    Downloads: 0 This Week
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