Showing 4124 open source projects for "dr java windows"

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  • 1
    VarScan

    VarScan

    Variant detection in next-generation sequencing data

    Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes. THE LATEST VERSION IS AVAILABLE ON GITHUB
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    Downloads: 53 This Week
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  • 2

    S2O

    Converting IBM SPSS files to CDISC ODM

    This tool can be used to convert data collections based on IBM SPSS Statistics to the data standard for definition and exchange of clinical trials: CDISC ODM (Operational Data Model). Possible use-cases: - A project is running out of funding and scientific data collection should be performed in free available/open-source data capture systems - Advantages of reliable EDC systems like: Data security (role/right management), backup infrastructure, support of the entire clinical trial...
    Downloads: 0 This Week
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  • 3

    jAgg

    jAgg - Java Aggregation Operations

    jAgg is a Java 5.0 API that supports “group by” operations on Lists of Java objects: aggregate operations such as count, sum, max, min, avg, and many more. It supports Super Aggregation: Rollups, Cube, and Grouping Sets. It supports analytic operations such as lag/lead and row number and more. It also allows custom aggregate and analytic operations.
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  • 4
    This is a parser in Java for Lisp S-expressions. An S-expression or sexp (for symbolic expression) is a convention for representing data using parentheses.
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  • Atera all-in-one platform IT management software with AI agents Icon
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  • 5
    The bflow* Toolbox is an open source tool kit for business process management. The objective of bflow* is to explore new ways and scenarios for the development and use of modelling tools.
    Downloads: 1 This Week
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  • 6
    aisconvert
    Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.
    Downloads: 0 This Week
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  • 7
    TOVAL: Toms Java Library

    TOVAL: Toms Java Library

    Library with classes for common programming issues.

    TOVAL comprises a set of java classes for common programming issues. It includes utils for arrays, lists, sets and collections for convenient handling and modification, but also support for mathematic definitions concerning logic (clauses + resolution) together with some algorithms for permutations, powersets and resolution. Additionally it contains a number of types for multisets, matrices with object keys and much more.
    Downloads: 0 This Week
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  • 8
    MattsMathTools

    MattsMathTools

    MathTools is an aid in preparing printed math tests.

    Matt's MathTools is a Java application designed as an aid in preparing printed math tests. It is easily embedded in other Java applications or it can be used alone as a single-user desktop app. It includes a scripting environment, numerous demonstration classes and several general utilities. A scripting tutorial is also available.
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  • 9
    EXMARaLDA
    EXMARaLDA stands for "Extensible Markup Language for Discourse Annotation". It's a system of concepts, data formats and tools for the computer assisted transcription and annotation of spoken language, and the analysis of spoken language corpora. This project's source code has moved to https://github.com/Exmaralda-Org/exmaralda
    Downloads: 0 This Week
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  • 10
    Java ray tracing library. Intended for optic system design, not intended for rendering. Handles generic surfaces (cone, sphere, cylinder, user-defined) including Fresnel or micro-structured material; handles reflection and refraction.
    Downloads: 0 This Week
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  • 11
    mathCollection is a java package representing a consistent and efficient extension to the Java Collection Framework of JDK 1.4. It offers different kinds of sets with mathematical, non-destructive functions.
    Downloads: 0 This Week
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  • 12
    Mutation Mapper
    PLEASE NOTE: THIS PROJECT PAGE WILL NO LONGER BE UPDATED - PLEASE USE THE GITHUB PAGE (https://github.com/gantzgraf/MutationMapper) TO FIND THE LATEST RELEASE (https://github.com/gantzgraf/MutationMapper/releases/latest). Predict functional consequences of mutations identified from sanger sequencing.
    Downloads: 0 This Week
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  • 13
    The Protein Similarity Network

    The Protein Similarity Network

    Human protein similarity network used to predict drug safety.

    This is the protein similarity network - PSIN. Here, the nodes are human proteins and they are linked only if they share considerable sequence similarity. We found that this network is particularly useful to distinguish approved from problematic drug-targets. Here you also find the complete set of programs and datasets we used for this purpose. Free to help further test and develop this project. Your help and expertise are much appreciated ! If you have any questions, please do...
    Downloads: 0 This Week
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  • 14
    safecap

    safecap

    Safecap Platform for improving railway capacity via formal modelling

    The overall aim of the SafeCap project is to develop modelling techniques and tools for improving railway capacity while ensuring that safety standards are maintained. Useful links: Project homepage: http://http://safecap.co.uk/
    Downloads: 0 This Week
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  • 15
    JMCAD - modeling of dynamic systems
    JMCAD is an program for the modeling and simulation of complex dynamic systems. This includes the ability to construct and simulate block diagrams. The visual block diagram interface offers a simple method for constructing, modifying and maintaining complex system models. The simulation engine provides fast and accurate solutions for linear, nonlinear, continuous time, discrete time, time varying and hybrid system designs. With JMCAD, users can quickly develop software or "virtual"...
    Downloads: 5 This Week
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  • 16
    JAGAL: Java Graph Library

    JAGAL: Java Graph Library

    Java graph library

    JAGAL provides implementations for directed graphs (weighted and unweighted) and varoius types of transition systems as well as utils for graph traversal and modification. JAGAL builds upon the Java library TOVAL (located at http://sourceforge.net/p/toval). To use JAGAL, make sure the TOVAL library is on the build path. This library uses and encloses jGraphX (https://github.com/jgraph/jgraphx). A documentation for JAGAL can be found under http://doku.telematik.uni-freiburg.de/jagal.
    Downloads: 0 This Week
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  • 17
    Implementation of an OGC Web Map Service, primarily for serving images dynamically generated from NetCDF data files (although other file formats can also be handled). Also an AJAX web mapping interface based on OpenLayers.
    Downloads: 0 This Week
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  • 18
    Gravity Simulator

    Gravity Simulator

    Multithreaded N-Point Gravity Simulation for PC and Android

    Create a sun, spin some asteroids around it, and watch them collide and form planets. An N-Point Gravity Simulator is a realistic simulation in which all points attract each other: even the smallest asteroid has its own gravitational field that can affect even a large sun far away from it. Can be reused as a library for making games. If used as library, license is GNU LGPLv3, otherwise it's GNU GPLv3.
    Downloads: 0 This Week
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  • 19

    VSOL

    Aplicativo para simulação e solução de vigas

    Este aplicativo foi desenvolvido através de um trabalho de conclusão do curso de Engenharia Civil da Universidade do Extremo Sul Catarinense. Seu uso está restrito para fins educacionais e não deve ser reproduzido comercialmente. O usuário é responsável pelas conclusões dos resultados obtidos pelo aplicativo. O autor, orientador e instituição de ensino envolvidos no desenvolvimento desse aplicativo, não têm nenhum dever legal ou responsabilidade por danos causados de forma direta ou indireta...
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  • 20
    Eclim is a set of eclipse and vim plugins to integrate the two projects.
    Downloads: 0 This Week
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  • 21
    Qfsm

    Qfsm

    A graphical Finite State Machine (FSM) designer.

    A graphical tool for designing finite state machines and exporting them to Hardware Description Languages, such as VHDL, AHDL, Verilog, or Ragel/SMC files for C, C++, Objective-C, Java, Python, PHP, Perl, Lua code generation.
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    Downloads: 7 This Week
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  • 22
    BANNER is a named entity recognition system intended primarily for biomedical text. It uses conditional random fields as the primary recognition engine and includes a wide survey of the best techniques described in recent literature.
    Downloads: 0 This Week
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  • 23

    eNTranslator

    To aid translation of satsangs of Paramhamsa Nithyananda

    To aid translation of satsangs of Paramhamsa Nithyananda. Can be used for general purpose by others as well. This translator desktop app uses google translator to translate English text. The auto generated translations are then enriched with human alternation using an easy graphical user interface. Time stamp information may be synched and a subtitle file or a simple textual output may be generated. Additionally it is planned to use google voice tools to also add voice over from these...
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  • 24
    Library of various Java Swing user interface components, with emphasis on views and editors for complex data structures, like collections, sets, lists, maps, graphs, and matrices.
    Downloads: 0 This Week
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  • 25
    WOLFGANG

    WOLFGANG

    Editor for Petri nets

    Wolfgang is a lightweight tool that allows users to easily create and edit Petri nets and check them against general and workflow specific net properties. Specifically, Wolfgang supports full PNML conform editing functionality of Place-Transition Nets (P/T-Nets) and Colored Petri Nets (CPN) as they are defined in the SEPIA package. Its simple and easy to use interface allows to quickly create Petri nets from scratch, edit them graphically in many ways, store and even export them as PDFs. Use...
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