Showing 2376 open source projects for "sql command line"

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  • 1

    COFILOS

    A Development Framework for Coldfire

    Contains a framework for Coldfire MCUs like 52254. The framework supports a Command Line Interface (CLI) that may work from Serial port, USB or ENET. The framework uses Processor Expert and IDE requirement is MCU Eclipse 10.4 from Freescale. Includes the FunkOS Realtime Operating System by Funkenstein Software Consulting, available at http://funkos.sourceforge.net Mainly it is a support package for the development board Perseus, but I have ported also the RTOS to MCF52233DEMO board. ...
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  • 2
    CoreTML framework
    CoreTML framework is an open-source template-based configuration system allowing the developer to create parametrized templates by inserting special content to any text files. Its main purpose is to serve as a toolkit for semiconductor IP core creation (based on VHDL/Verilog).
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  • 3
    FieldTrip

    FieldTrip

    The MATLAB software toolbox for MEG and EEG analysis

    FieldTrip is the Matlab toolbox for EEG and MEG data. It includes algorithms for simple and advanced analysis, such as importing, preprocessing, time-frequency analysis, source reconstruction, statistical testing and connectivity analysis.
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  • 4
    An urban air pollution model based on the mass-conservation principle and the advection-diffusion equation. A technical report R-207-2012 can be found in http://www.nies.go.jp/kanko/kenkyu/index-e.html
    Downloads: 1 This Week
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  • 5

    came

    Identification of chromatin accessibility from NOMe-seq

    Chromatin accessibility plays a key role in epigenetic regulation of gene activation and silencing. Open chromatin regions allow regulatory elements such as transcription factors and polymerases to bind for gene expression while closed chromatin regions prevent the activity of transcriptional machinery. Recently, nucleosome occupancy and methylome sequencing (NOMe-seq) has been developed for simultaneously profiling of chromatin accessibility and DNA methylation on single molecules. However,...
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  • 6
    Celera Assembler (CA) is a whole-genome shotgun (WGS) assembler for the reconstruction of genomic DNA sequence from WGS sequencing data.
    Downloads: 3 This Week
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  • 7
    This software searches the potential energy surface of small to medium size atomic systems for global minima using quantum ab initio techniques. It performs bond rotations and molecule translations and rotations on a Linux cluster with MPI.
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  • 8
    RoiView
    Explore InSAR data and more
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  • 9

    XmgFit

    A wrapper to use Xmgrace's curve fitting capability on the shell.

    XmgFit is a wrapper for Xmgrace (*) allowing to use comfortable the non-linear curve fitting capability of Xmgrace from the command line. Therefore the capabilities are limited by xmgrace. Please refer to the xmgrace users guide for more details. It is also handy to incorporate in shell scripts. The -s or --scripty option returns all result values xmgrace provide in an EVALuable format to make them easy available in shell scripts. *) http://plasma-gate.weizmann.ac.il/Grace/
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  • 10
    PyRadmon Reborn

    PyRadmon Reborn

    PyRadmon, a Python script to use on both Linux and Windows.

    PyRadmon Reborn. This project started after the original programmers quit supporting it. The project now contains support for audio*, has a version that supports two Geiger counters** and a cleaner, more stable code. * = PyAudio is used as library for the audio support. ** = The two counters both run in their own thread. UPDATE-2015-2: * Added timeouts to sockets to prevent crashing of the script. * Updated some comments. UPDATE-2015-1: Since there have been some passed time...
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  • 11
    This project concerns the development of human language technology resources, based on the approach to share or recycle resources between closely related language. http://gerhard.pro/closely-related-languages/
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  • 12

    ENLY

    Bioinformatic tool to improve draft genome assemblies by closing gaps

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  • 13

    BTA_lib

    Simple CLI client for 6-meter telescope BTA

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  • 14
    Linknx is an automation platform providing high level functionalities to EIB/KNX installation. The rules engine allows execution of actions based on complex logical conditions and timers. Lightweight design allows it to run on embedded Linux. The project has been migrated to Github in 2015: https://github.com/linknx/linknx
    Downloads: 2 This Week
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  • 15
    Orfeo ToolBox

    Orfeo ToolBox

    OTB is an open-source C++ library for remote sensing images processing

    ...Orfeo ToolBox has three main access depending on the category of user: write processing chains in C++ using existing filters or creating new ones, use the OTB applications, which is a plugin-based framework allowing to extend high-level processing chains from various environment ( command-line, QT, QGis, Python....) or use Monteverdi, a software for everyday life image manipulation and analysis.
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    Downloads: 30 This Week
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  • 16

    FGAP

    an automated gap closing tool

    Development version: https://github.com/pirovc/fgap FGAP aims to improve genome sequences by merging alternative assemblies or incorporating alternative data, analyzing the gap region and indicating the best sequence to close the gap.
    Downloads: 2 This Week
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  • 17
    Perl OBD-II Logger

    Perl OBD-II Logger

    A Perl program for logging OBD-II PID data

    The goal of the Perl OBD-II Logger project is to create a flexible and efficient application that can capture and log OBD-II Mode 0x01 PID data from an automotive scantool. It is designed with accurate and efficient PID data logging in mind, and provides NO support for reading or resetting diagnostic trouble codes. By default, the output log file contains time-stamped PID values in a simple Comma Separated Values (CSV) format that can be readily imported into popular data analysis or...
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  • 18

    beam3d

    3d beam FEM structural analysis

    3D FEM structural analysis using the beam element. It works with macro preprocessor and system pipes.
    Downloads: 1 This Week
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  • 19
    Morpheus search algorithm

    Morpheus search algorithm

    a mass spectrometry–based proteomics database search algorithm

    Morpheus is a mass spectrometry–based proteomics database search algorithm designed from the ground up for high-resolution tandem mass spectra. We have discovered that for high-resolution MS/MS, simple spectrum preprocessing and scoring performs superior to more complex algorithms originally developed for low-resolution MS/MS, such as Sequest, Mascot, and OMSSA. Morpheus is also very fast—up to nearly 5 times faster than OMSSA for large human datasets. It is written in C# and is available...
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  • 20
    NGS-TOOLBOX

    NGS-TOOLBOX

    Handy tools to process/analyze next generation sequencing (NGS) data

    ...Each tool is designed to ensure convenient and intuitive usage. Installation and usage does not require any bioinformatics skills. All scripts work out-of-the-box. Advanced users may use the command line based Perl scripts to build automated sequence analyses/processing pipelines. If you use the NGS TOOLBOX you for publication purposes you can cite the following methods paper: Rosenkranz D, Han CT, Roovers EF, Zischler H, Ketting RF. Piwi proteins and piRNAs in mammalian oocytes and early embryos: From sample to sequence. ...
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  • 21
    FREJ
    FREJ stands for "Fuzzy Regular Expressions for Java" - it is a command-line tool and library which allow you easily compare strings with patterns disregarding nasty typos and considering several variants (like "Barack Obama", "B.H.Obama" etc.) Project sources are moved to github: https://github.com/RodionGork/FREJ
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  • 22

    gladTeX

    GladTeX -- embed LaTeX-quality images in HTML

    GladTeX is a preprocessor that enables the use of LaTeX maths within HTML code. The maths, embedded in <eq>..</eq> tags, as if within $$..$$ in LaTeX, is fed through latex and replaced by images. Additionally, alt-tags are auto-generated which display the LaTeX-equations when the HTML is viewed e.g. with a text mode browser or by someone with vision loss. The project home has moved, please visit https://humenda.github.io/GladTeX
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  • 23

    sam_comp

    Compression for SAM/BAM file format

    This is a simple arithmetic coding based compressor for the SAM and BAM (DNA sequence alignment) file format.
    Downloads: 0 This Week
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  • 24

    Otanes

    Otanes is a live TV simulator for Content-Centric Networking (CCN).

    Otanes is a highly configurable component-based CCN simulator (based on OMNeT++ simulation environment) specifically optimized for live TV research activities. It has armed with EvalVid (a video quality evaluation toolset) to reconstruct the received video and evaluate QoS and QoE metrics. It has.introduced background traffic and traffic engineering capability as well.
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  • 25
    Mychem is a chemoinformatics extension for MySQL.
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