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QTc66
Linux Qt application for reading the RD TC66
Linux Qt application for reading the Rui Deng TC66/TC66C USB Power Meter data and export it in CSV format. As manufacturer doesn't develop a Linux application for reading the device through USB, I've develop a simple one. It's based on the following projects: - https://github.com/Ralim/TC66C - https://github.com/kolinger/rd-usb This application has been made with QtCreator and depends on QtCharts library, so you must install it for compiling. It also uses the a copy of Callout class from https://github.com/eyllanesc/stackoverflow/tree/master/questions/51085719 (You can see https://stackoverflow.com/a/51092040 for description) The application does not support Bluetooth communication with TC66C, only USB. -
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LymPHOS2
LymPHOS2 Web-App
LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes... -
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The latest ESMF development is happening in GitHub: https://github.com/esmf-org/esmf https://earthsystemmodeling.org The Earth System Modeling Framework provides high-performance software infrastructure and superstructure for the construction and coupling of climate, weather, and data assimilation applications.
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Tux Math Scrabble
12÷16×3=9÷4
Latest version 0.9.1 runs on Python3. Date: June 15, 2023 Online/touch-screen version: https://www.asymptopia.com/tuxmathscrabble Encourages kids to construct compound equations and consider multiple abstract possibilities. -
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EME
Episodic Memory Extractor
The next step after: https://sourceforge.net/projects/aseryla/ Working in progress -
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eGPXviewer
eGPXviewer is a 3D GPX track viewer
...The GPX exchange format is a standard output file format available in most GPS tracker devices/applications. It is human readable text file written in XML. Read more about the GPX exchange file format here https://en.wikipedia.org/wiki/GPS_Exchange_Format. eGPXviewer is currently available for Win10 and Linux (Ubuntu/Mint, CentOS, OpenSUSE, Raspbian) operating systems. ™ Registered trademarks for the respective owners. -
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HL7 Inspector
HL7 Inspector is a tool for managing HL7 messages
The HL7 Inspector project has moved to Bitbucket. https://bitbucket.org/crambow/hl7inspector All new releases can be found there. The web-based version can still be found at www.hl7inspector.com -
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OpenMultiphysics
Application Integration for HPC Multiphysics
The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities. Design and development in this project is driven by the Consortium for Open Multiphysics. Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT -
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OSDLab
Open Source Digital Laboratory
Open Source Digital Laboratory compatible with Arduino project. This software consists from C++/Qt programs such as dotScope (https://dotscope.sourceforge.io) - is a scientific shell for live experiment, dlCAM (https://dlcam.sourceforge.io) - computer aided manufacture for Arduino and others projects, img-map (https://img-map.sourceforge.io) - image digitaizer. -
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EPICS Version 4
MOVED project - go to: https://epics-controls.org
This project has been merged into EPICS Base. Visit https://epics-controls.org for further information. -
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Phenalysis
Analyze agronomic plant research plots in aerial orthomosaic images.
...Please cite the following reference in your work if you use Phenalysis: Khan Z and Miklavcic SJ (2019) An Automatic Field Plot Extraction Method From Aerial Orthomosaic Images. Front. Plant Sci. 10:683. doi: https://doi.org/10.3389/fpls.2019.00683 This tool is being developed through the sponsorship of the Australian Research Council's Industrial Transformation Research Hub on Wheat in a Hot and Dry Climate. https://www.wheathub.com.au/ -
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ZCAD
Simple CAD program
Project moved to https://github.com/zamtmn/zcad -
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RegexToNFA
Compiles regular expressions into modular NFA
This program compiles regular expressions (regexes) written in the modified ECMAScript regex grammar into modular nondeterministic finite automata suitable for hardware acceleration. This was originally an extended re-implementation of the "front-end" part in the following paper: https://www.computer.org/csdl/proceedings/reconfig/2008/3474/00/3474a073-abs.html It has since grown to include conversion of a set of NFAs to a DFA; compilation of NFAs to instruction suitable for simulation; and compilation of a DFA to hash-based data structures for a simulator. -
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EasyNetVars
Data Exchange between CoDeSys Devices and .NET via Network Variables
... - Read and Write Operations CoDeSys -> .NET - Method to create .GVL-File to import in CoDeSys Example in Step 7 (TIA-Portal) for Data-exchange between CoDeSys and Siemens S7 Devices CoDeSys -> Step7 (S7-1200): https://sourceforge.net/projects/easynetvars/files/NetVarsStep7/ See WIKI and Implementation-Guide for more information -
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DSPatch
The Refreshingly Simple C++ Dataflow Framework
...DSPatch is not limited to any particular domain or data type, from reactive programming to stream processing, DSPatch's generic, object-oriented API allows you to create virtually any dataflow system imaginable. *See also:* DSPatcher ( https://github.com/MarcusTomlinson/DSPatcher ): A cross-platform graphical tool for building DSPatch circuits. DSPatchables ( https://github.com/MarcusTomlinson/DSPatchables ): A DSPatch component repository. -
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PsPM
A matlab suite for Psycho-Physiological Modelling
...A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although this website will maintained to provide further releases, there will be no active development on the SVN repository. Thank you for your understanding and for using PsPM. -
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MetaErg
Metagenome Annotation Pipeline
MetaErg is a stand-alone and fully automated metagenome and metaproteome annotation pipeline published at: https://www.frontiersin.org/articles/10.3389/fgene.2019.00999/full. If you are using this pipeline for your work, please cite: Dong X and Strous M (2019) An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs. Front. Genet. 10:999. doi: 10.3389/fgene.2019.00999 The instructions on configuring and running the MetaErg pipeline is available at GitHub repository: https://github.com/xiaoli-dong/metaerg -
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PPIXpress
specific protein interaction networks from transcript expression
...Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms’ regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal alterations in protein connectivity caused by alternative splicing. The original publication can be found on https://bioinformatics.oxfordjournals.org/content/32/4/571 . -
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QMForge reads output from various quantum mechanical calculations and provides tools for analyzing these results. Specifically, population (Mulliken and C-squared), fragment, and charge decomposition analyses are available. See https://qmforge.net for more info.
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coarrays
A free Fortran 2008, 2018 coarrays course with notes and exercises
...The F2008 standard provides coarray syntax, remote calls, coarray data objects, allocatable coarrays, syncronisation, atomics, etc. F2018 adds new functionality, e.g. collectives, teams, events, more atomics. Coarrays are used extensively in CASUP library for HPC (https://cgpack.sourceforge.io). The course is aimed at experienced Fortran users. Working knowledge of Fortran is assumed. The course is designed for a 1 day study with an instructor. Multiple exercises with full solutions are accompanied by notes. This course is taught to the University of Bristol HPC users. Exercises have been verified with Intel and GCC/OpenCoarrays. ... -
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FreeSketches for MagicDraw / CSM
A plugin to use Free Sketches with SysML models to support MBSE
...Additional information on the approach to use sketch snippets can be found in publications: G. Moeser, A. Albers and S. Kümpel, „Usage of Free Sketches in MBSE“, in Proceedings First IEEE International Symposium on Systems Engineering, Rom, 2015 Link: https://doi.org/10.1109/SysEng.2015.7302511 A. Albers, G. Moeser and M. Salihoglu, „Vernetzen von freien Skizzen in SysML Systemmodellen zur Unterstützung der Konstrukteurstätigkeit“, in 15. Gemeinsames Kolloquium Konstruktionstechnik, 2017. -
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pyPIDTuneMethods
PID controller design and tuning
...pyPIDTuneMethods is based on scipy (numpy, scipy) <http://www.scipy.org/ >, guiqwt <http://code.google.com/p/guiqwt/ >, python control <http://python-control.org/> and pyQt5 <http://www.riverbankcomputing.co.uk >. If you are not familiar with python you can use winpython <http://winpython.sourceforge.net/>. You can also download it from pypi <https://pypi.org/project/pyPIDTuneMethods/>. You may also just download the Excel file 'xlPIDTunemethods.xlsm' <https://sourceforge.net/projects/pypidtunemethods/files/xlPIDTuneMethods.xlsm/download> with the predefined tuning methods. Checkout the following youtube videos : PID Tune <https://youtu.be/9GAMoq5DDlc> -
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dBEAST
digest BEAST
This code has been used in the study: Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa; PLoS Pathogens 2019 https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1007976 Please note that the code includes test input data that does not necessarily reproduce the results included in the manuscript. -
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LMAP_S
Lightweight Multigene Alignment and Phylogeny eStimation
Emanuel Maldonado and Agostinho Antunes (2019) LMAP_S: Lightweight Multigene Alignment and Phylogeny eStimation. BMC Bioinformatics, 20:739. doi: https://doi.org/10.1186/s12859-019-3292-5 -
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2D Structural Analysis
Determine the bending moments, shear forces, axial forces and displace
2D Structural Analysis in Python by Ritchie Vink A collection examples of 2D Finite Element Analysis (FEA) made with Jupyter Notebook Lab - https://jupyter.org/ To install Jupyter - https://jupyter.org/install ===== App is available on Play Store -> https://play.google.com/store/apps/details?id=com.ulm.struct If you want to download a python editor for your android smartphone follow this link -> https://play.google.com/store/apps/details?id=com.ulm.python
